Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05109 and RBAM_031040
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:35
# Commandline: needle
# -asequence dna-align/BSNT_05109___opuBB.1.9828.seq
# -bsequence dna-align/RBAM_031040___opuBB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05109___opuBB-RBAM_031040___opuBB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05109___opuBB-RBAM_031040___opuBB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05109___opuBB
# 2: RBAM_031040___opuBB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 674
# Identity: 495/674 (73.4%)
# Similarity: 495/674 (73.4%)
# Gaps: 40/674 ( 5.9%)
# Score: 1747.0
#
#
#=======================================
BSNT_05109___ 1 ATGCATCATATTGTTCAATTTTTGCAAACCAATGGGGGCGAGCTTCTTTA 50
|||.||||.|..||.||||||||.||..|.|||||.||.|||.|.|||||
RBAM_031040__ 1 ATGAATCAGACCGTGCAATTTTTACAGGCAAATGGAGGAGAGATGCTTTA 50
BSNT_05109___ 51 TAAAACATACGAGCATAT-TACGATATCGCTCATT----GCTGTGATCTT 95
||||||||..||||||.| ||| || |||||| ||.||.||
RBAM_031040__ 51 TAAAACATGGGAGCATCTGTAC---AT--CTCATTAATCGCCGTCAT--- 92
BSNT_05109___ 96 AGGTG----TGCTGGTTGCCGTCCCCCTCGGAGTTGTGCTTACCAGAATG 141
||.| |.||.|..|||||.||.|||||.||..||||.||.||.|||
RBAM_031040__ 93 -GGCGGGCATTCTCGCCGCCGTTCCGCTCGGCGTCCTGCTGACGAGGATG 141
BSNT_05109___ 142 AAAAAAGGAGCCGGCACCATTATCGGCATTGTCAATATCATTCAGACGCT 191
||||.||||||||||.||.|.||||||||.|||||.||||||||.||..|
RBAM_031040__ 142 AAAAGAGGAGCCGGCGCCGTCATCGGCATCGTCAACATCATTCAAACTTT 191
BSNT_05109___ 192 GCCGAGTCTGGCCATCCTCGCTTTTTTTATTCCGCTCCTTGGTGTAGGGA 241
||||||.||.|||||.||.||.||||||||||||||..|.||.|||||.|
RBAM_031040__ 192 GCCGAGCCTTGCCATTCTTGCGTTTTTTATTCCGCTTTTAGGCGTAGGAA 241
BSNT_05109___ 242 AGGTTCCGGCCATTGTGGCTTTGTTTTTCTATTCCGTATTGCCGATTCTT 291
||.|.||||||.|||.|||..|||||||||||||..|..||||||||||.
RBAM_031040__ 242 AGATCCCGGCCGTTGCGGCGCTGTTTTTCTATTCGATGCTGCCGATTCTC 291
BSNT_05109___ 292 CGCAACACGTATACCGGCATTCGCGGCGTCAA----CAAAAATCTGCTCG 337
.|.|||||||||||.||.||||.||||||||| | ||||..|.|
RBAM_031040__ 292 AGAAACACGTATACGGGGATTCTCGGCGTCAATCGGC----ATCTTTTGG 337
BSNT_05109___ 338 AGTCTGGTAAAGGAATCGGAATGACGCC--GGCTGAACAAGTC-CGCTTG 384
|.||.||.|||||||||||.||||||.| || ||.||..|| .||||
RBAM_031040__ 338 AATCGGGAAAAGGAATCGGCATGACGGCATGG--GAGCAGATCAGGCTT- 384
BSNT_05109___ 385 GTGGAGCTGCCGCTTGCCGCACCAGTAATCATGGCGGGAATCAGAACATC 434
||.|||||.|||||||||||.||.||.|||||||||||.|||||.||.||
RBAM_031040__ 385 GTAGAGCTCCCGCTTGCCGCTCCGGTCATCATGGCGGGCATCAGGACGTC 434
BSNT_05109___ 435 GACGATTTACTTAATCGGCTGGGCCACGCTTGCTTCCTTTATCGGAGGCG 484
..|||||||.||||||||||||||.|||||.||.|||||||||||.||.|
RBAM_031040__ 435 TTCGATTTATTTAATCGGCTGGGCGACGCTCGCCTCCTTTATCGGCGGAG 484
BSNT_05109___ 485 GCGGATTGGGTGATTACATTTTTATCGGACTGAATTTATATCAGCCGGAA 534
||||..||||.|||||||||||||||||..|.||..|.|||||||||||.
RBAM_031040__ 485 GCGGGCTGGGAGATTACATTTTTATCGGCTTAAACCTTTATCAGCCGGAG 534
BSNT_05109___ 535 TATATCATCGGGGGCGCGGTACCTGTCAC---GATATTGGCAATTGTGAT 581
|||||.||||..|||||.||.||.||||| |.|...|||| |...|
RBAM_031040__ 535 TATATTATCGCAGGCGCCGTTCCGGTCACAGTGCTTGCGGCA---GCCGT 581
BSNT_05109___ 582 TGATTATGTGCTGGCAGTTG-CTGAACGAAAACTGACACCTGCCGGCATG 630
.|||||..|||||| .|.|| |.|||||.|||.|.||.||||.|||..||
RBAM_031040__ 582 CGATTACATGCTGG-GGATGACAGAACGGAAAGTCACGCCTGACGGGCTG 630
BSNT_05109___ 631 CAGAGATTGAAGGAATTGTCATAA 654
.|.||..|.|||||....||||||
RBAM_031040__ 631 AAAAGCATAAAGGACGCTTCATAA 654
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