Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05102 and RBAM_030940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05102___yvaN.1.9828.seq
# -bsequence dna-align/RBAM_030940___yvaN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05102___yvaN-RBAM_030940___yvaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05102___yvaN-RBAM_030940___yvaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05102___yvaN
# 2: RBAM_030940___yvaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 412
# Identity: 292/412 (70.9%)
# Similarity: 292/412 (70.9%)
# Gaps: 5/412 ( 1.2%)
# Score: 980.0
#
#
#=======================================
BSNT_05102___ 1 ATGGAAAGCTTTGGCGAACAATTACGGGCATTGCGTGAAGAGAGAAAGTT 50
.||||||||||.||..|||||||.|||.|||||||.|||.|.||..|..|
RBAM_030940__ 1 GTGGAAAGCTTCGGGAAACAATTGCGGACATTGCGGGAAAAAAGGCATCT 50
BSNT_05102___ 51 AACAGTCAACCAGCTGGCGACTTATTCAGGCGTAAGCGCGGCCGGCATCT 100
.|||||.|||||||||||.||.|||||||||||.|||||.||.||.||||
RBAM_030940__ 51 GACAGTGAACCAGCTGGCAACGTATTCAGGCGTCAGCGCCGCGGGAATCT 100
BSNT_05102___ 101 CCAGAATCGAAAACGGAAAACGGGGCGTTCCCAAACCTGCCACCATCAAA 150
|..|.||.||||||||.|||||.||.||.||.||||||||.|||||.|||
RBAM_030940__ 101 CGCGGATTGAAAACGGCAAACGCGGGGTGCCGAAACCTGCAACCATTAAA 150
BSNT_05102___ 151 AAACTGGCAGAGGCCTTAAAAATTCCTTATGAGGGACTTATGTACAAGGC 200
||.||.|||||.||.||||||||.||.|||||||.|||.|||.|.|.|||
RBAM_030940__ 151 AAGCTCGCAGATGCGTTAAAAATCCCGTATGAGGAACTGATGCAGACGGC 200
BSNT_05102___ 201 TGGTTACATCGAAGA-AGTGCATGAAGCCAGGGCCCCTTATGAAACGAAG 249
.||.|||||.| ||| .||.||.|||.|.||.|||||.||.||.|||...
RBAM_030940__ 201 GGGATACATAG-AGACCGTTCAGGAAACGAGAGCCCCGTACGACACGGGC 249
BSNT_05102___ 250 TGCAAGCTGCTTGAAAAAGCGGAGGCTTATGATCTGAAAAACCTTGCGCT 299
||||...||||.||||||||.||..|.|||||.|||.|..|..|..|.||
RBAM_030940__ 250 TGCACCTTGCTGGAAAAAGCCGAAACGTATGAGCTGCATGATTTATCCCT 299
BSNT_05102___ 300 TCTTGAGAACGAAAAGTGGCAATATCTCAATAAAGAAGATTTGCTCATGC 349
..|.|||...||.||.||||...|.||....||||||||..||.|..|||
RBAM_030940__ 300 ATTGGAGCGGGAGAACTGGCGGCACCTGTCGAAAGAAGACCTGGTTCTGC 349
BSNT_05102___ 350 TGGATCATTATTTTTCGTTTATTTCAGACGAAGCCAAAAAACGGTCTGCT 399
|.|||.|.||.|||.||||..|.||.|..||||||||||||.|..|...|
RBAM_030940__ 350 TTGATAAATACTTTGCGTTCTTATCGGCTGAAGCCAAAAAAAGAACAAAT 399
BSNT_05102___ 400 GATGACTGA--- 408
||.||||.|
RBAM_030940__ 400 GAAGACTCATGA 411
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