Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05101 and RBAM_030930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05101.1.9828.seq
# -bsequence dna-align/RBAM_030930___yvzC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05101-RBAM_030930___yvzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05101-RBAM_030930___yvzC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05101
# 2: RBAM_030930___yvzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 151/231 (65.4%)
# Similarity: 151/231 (65.4%)
# Gaps: 45/231 (19.5%)
# Score: 615.0
#
#
#=======================================
BSNT_05101 1 ---------------------------------------------ATGGT 5
|||||
RBAM_030930__ 1 GTGGTCGAAAAGATACAGATCAGAAGAGATTATGTGCTGCAGTATATGGT 50
BSNT_05101 6 TAATAACGATTATTCCCTTAATCAGCTTGCGCTGGAAATCGGAGTCTCAC 55
.|||||.||.||.||..|.||.|||||.||.|||||.||||||.|.||.|
RBAM_030930__ 51 CAATAATGACTACTCGTTAAACCAGCTCGCCCTGGAGATCGGAATATCTC 100
BSNT_05101 56 CCGCCACACTGAGCCGCGTGCTGAATGGAGAAAGACGGCCGGGGCAGCTT 105
||||||||||||||||.||.|||||||||||..|..|||||||.|||||.
RBAM_030930__ 101 CCGCCACACTGAGCCGTGTACTGAATGGAGAGCGGAGGCCGGGCCAGCTG 150
BSNT_05101 106 GTGATCGGTAAAATGCTTCACTATTTTAATTTGAAATTTGAGGATCTTTT 155
||.|||||.||||||||..|.||.|||.|..||||||||||.||||||||
RBAM_030930__ 151 GTCATCGGAAAAATGCTCTATTACTTTGACATGAAATTTGAAGATCTTTT 200
BSNT_05101 156 TTACTATGATTTTATTGACAAAAGTCAATGA 186
||||||.||.|||.|||||||||||||||||
RBAM_030930__ 201 TTACTACGACTTTGTTGACAAAAGTCAATGA 231
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