Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05089 and RBAM_030890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:34
# Commandline: needle
# -asequence dna-align/BSNT_05089___smpB.1.9828.seq
# -bsequence dna-align/RBAM_030890___smpB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05089___smpB-RBAM_030890___smpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05089___smpB-RBAM_030890___smpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05089___smpB
# 2: RBAM_030890___smpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 472
# Identity: 402/472 (85.2%)
# Similarity: 402/472 (85.2%)
# Gaps: 2/472 ( 0.4%)
# Score: 1718.0
#
#
#=======================================
BSNT_05089___ 1 ATGCCAAAAGGGTCAGGAAAAGTATTATCTCAAAATAAGAAAGCCAATCA 50
|||||||||||.|||||.|||||||||||.|||||.||.|||||.||.||
RBAM_030890__ 1 ATGCCAAAAGGATCAGGCAAAGTATTATCACAAAACAAAAAAGCAAACCA 50
BSNT_05089___ 51 CGATTATTTTATAGAAGAAACCTATGAAACAGGCATCGTTCTGCAAGGAA 100
.|||||.||||||||||||||||||||||||||||||||.|||||.||||
RBAM_030890__ 51 TGATTACTTTATAGAAGAAACCTATGAAACAGGCATCGTGCTGCAGGGAA 100
BSNT_05089___ 101 CCGAAATCAAATCGATTCGCGCCGGCCGCGTAAACCTTAAGGATTCCTTC 150
|.||.||.||.||.||.||||||||||||||||||.|.|||||||||||.
RBAM_030890__ 101 CAGAGATTAAGTCCATCCGCGCCGGCCGCGTAAACATGAAGGATTCCTTT 150
BSNT_05089___ 151 GCCAAAATCGAACGGGGAGAAGTGTTTCTCCACAATATGCACGTCAGCCC 200
||.||||||||.||.||.||||||||.||||||||.||||||.|||||||
RBAM_030890__ 151 GCGAAAATCGAGCGCGGCGAAGTGTTCCTCCACAACATGCACATCAGCCC 200
BSNT_05089___ 201 ATATGAGCAGGGAAACCGCTATAACCATGATCCGCTTCGGACAAGAAAGC 250
.||.|||||||||||||||||||||||.||.|||||.|||||.|||||||
RBAM_030890__ 201 GTACGAGCAGGGAAACCGCTATAACCACGACCCGCTCCGGACGAGAAAGC 250
BSNT_05089___ 251 TGTTAATGCACCGCAAGGAGATTAATAAGCTGATCGGGTTAACAAAGGAA 300
|.||.||||||.|.||.||.||.||||||||||||||..|.||.||.||.
RBAM_030890__ 251 TTTTGATGCACAGGAAAGAAATCAATAAGCTGATCGGCCTGACGAAAGAG 300
BSNT_05089___ 301 AAAGGCTATTCTCTCGTTCCGCTGAAGCTGTATTTAAAAAACGGCTTTGC 350
|||||.|||||.|||||.|||||||||||||||||.||||||||||||||
RBAM_030890__ 301 AAAGGATATTCCCTCGTGCCGCTGAAGCTGTATTTGAAAAACGGCTTTGC 350
BSNT_05089___ 351 CAAAGTGCTTCTCGGCCTTGGAAAAGGGAAGAAGAAC-TATGACAAACGG 399
|||||||.|..|||||||.|||||||||||||| ||| ||.||.|||||.
RBAM_030890__ 351 CAAAGTGTTAATCGGCCTCGGAAAAGGGAAGAA-AACATACGATAAACGC 399
BSNT_05089___ 400 GAAGATCTGAAGCGCAAGGACGCGAAGCGGGAAATCGAAAGAGCGTTCAG 449
||||||.|.||.||.||.|||||.||..|.||||||||||||||||||||
RBAM_030890__ 400 GAAGATTTAAAACGAAAAGACGCCAAAAGAGAAATCGAAAGAGCGTTCAG 449
BSNT_05089___ 450 AGACAGTCAAAAAGGCTTCTAA 471
||||||.|||||||||||||.|
RBAM_030890__ 450 AGACAGACAAAAAGGCTTCTGA 471
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