Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04995 and RBAM_030650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:32
# Commandline: needle
# -asequence dna-align/BSNT_04995___bdbC.1.9828.seq
# -bsequence dna-align/RBAM_030650___bdbC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04995___bdbC-RBAM_030650___bdbC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04995___bdbC-RBAM_030650___bdbC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04995___bdbC
# 2: RBAM_030650___bdbC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 432
# Identity: 333/432 (77.1%)
# Similarity: 333/432 (77.1%)
# Gaps: 27/432 ( 6.2%)
# Score: 1317.5
#
#
#=======================================
BSNT_04995___ 1 ATGAAAAATAGAATCGTATTTTTATATGCTTCCTGGGTTGTGGCTCTTAT 50
||||||||||||||||||||||||||||||||.|||||..|.||||||..
RBAM_030650__ 1 ATGAAAAATAGAATCGTATTTTTATATGCTTCTTGGGTGATAGCTCTTGC 50
BSNT_04995___ 51 CGCTATGCTGGGCAGCCTGTATTTCAGTGAAATCAGAAAGTTTATTCCAT 100
.||.|||||.||||||||.||||||||.||.||||||||.||.||.||.|
RBAM_030650__ 51 TGCCATGCTCGGCAGCCTATATTTCAGCGAGATCAGAAAATTCATACCGT 100
BSNT_04995___ 101 GTGAACTGTGCTGGTACCAGCGTATCCTCATGTATCCGCTCGTCCTGATT 150
|.||.|||||||||||.||..|.||.||||||||.|||||.|||||||||
RBAM_030650__ 101 GCGAGCTGTGCTGGTATCAAAGAATTCTCATGTACCCGCTTGTCCTGATT 150
BSNT_04995___ 151 TTAGGCATCGCCACCTTTCAAGGGGACACACGAGTGAAAAAATATGTGCT 200
|||||.|||||||||||.||.||.|||||.||.|||||||||||||||||
RBAM_030650__ 151 TTAGGAATCGCCACCTTCCAGGGTGACACGCGCGTGAAAAAATATGTGCT 200
BSNT_04995___ 201 CCCAATGGCGATTATAGGGGCATTCATTTCGATCATGCATTACTTAGAGC 250
.||.|||||..|.||.||.||.||.||.|||||||||||||||.|.||||
RBAM_030650__ 201 GCCGATGGCCGTCATCGGCGCGTTTATATCGATCATGCATTACCTTGAGC 250
BSNT_04995___ 251 AAAAAGTGCCCGGCTTTAGCGGCATTAAGCCATGTGTCAGCGGCGTGCCG 300
|.||.||||||||.||.||||||||.|||||.||||||..|||||||||.
RBAM_030650__ 251 AGAAGGTGCCCGGTTTCAGCGGCATCAAGCCGTGTGTCTACGGCGTGCCT 300
BSNT_04995___ 301 TGCTC----GGGCCAATATATTAACTGGTTTGGTTTTATTACGATTCCAT 346
||||| | ||||||||||||||||.|||||.|||||.|||||.|
RBAM_030650__ 301 TGCTCATCTG----AATATATTAACTGGTTCGGTTTCATTACCATTCCTT 346
BSNT_04995___ 347 TCCTGGCCCTGATTGCTTTTATCCTGATTATCATTTTTATGTGCCTGCTG 396
|||||||..|||..||.|||||.||.|||||.||.|..|||||..|..|.
RBAM_030650__ 347 TCCTGGCATTGACGGCATTTATTCTCATTATTATCTGCATGTGTTTTGTC 396
BSNT_04995___ 397 AAA-----------GGCGAAAAATCTGAATAA 417
||| ||| ||||| ||
RBAM_030650__ 397 AAAACGGAACGCGCGGC--AAAAT---AA--- 420
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