Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04973 and RBAM_030460

See Amino acid alignment / Visit BSNT_04973 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:30
# Commandline: needle
#    -asequence dna-align/BSNT_04973___sspJ.1.9828.seq
#    -bsequence dna-align/RBAM_030460___sspJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04973___sspJ-RBAM_030460___sspJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04973___sspJ-RBAM_030460___sspJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04973___sspJ
# 2: RBAM_030460___sspJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     113/141 (80.1%)
# Similarity:   113/141 (80.1%)
# Gaps:           0/141 ( 0.0%)
# Score: 453.0
# 
#
#=======================================

BSNT_04973___      1 ATGGGTTTCTTTAATAAAGATAAAGGAAAACGTTCCGAAAAAGAAAAAAA     50
                     |||..|||||||||.|||||.|||||||||.....|||.|||.|.|||||
RBAM_030460__      1 ATGTCTTTCTTTAACAAAGAAAAAGGAAAAAACAGCGATAAAAACAAAAA     50

BSNT_04973___     51 CGTAATCCAAGGAGCTCTTGAAGATGCTGGTTCAGCTCTAAAAGATGATC    100
                     |||.||.|||||.||.||||||||.||.|||.|||||||.|||||.||||
RBAM_030460__     51 CGTCATTCAAGGCGCGCTTGAAGACGCCGGTGCAGCTCTGAAAGACGATC    100

BSNT_04973___    101 CGCTTCAAGAAGCTGTGCAAAAAAAGAAAAATAATCGATAA    141
                     ||||||||||||||||.|||||.||.|||||.||.||.|.|
RBAM_030460__    101 CGCTTCAAGAAGCTGTTCAAAAGAAAAAAAACAACCGCTGA    141


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