Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04965 and RBAM_030420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:30
# Commandline: needle
# -asequence dna-align/BSNT_04965___fhuG.1.9828.seq
# -bsequence dna-align/RBAM_030420___fhuG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04965___fhuG-RBAM_030420___fhuG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04965___fhuG-RBAM_030420___fhuG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04965___fhuG
# 2: RBAM_030420___fhuG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1024
# Identity: 746/1024 (72.9%)
# Similarity: 746/1024 (72.9%)
# Gaps: 26/1024 ( 2.5%)
# Score: 2585.5
#
#
#=======================================
BSNT_04965___ 1 ATGAAAACAAAAACAAACAAACCGCTTATTGTAATGGCTGTGACCTTTTT 50
|||||...||||.|.||.||||||||....||.|||||.||.||.|||||
RBAM_030420__ 1 ATGAATGTAAAATCGAAAAAACCGCTGGCGGTCATGGCCGTTACGTTTTT 50
BSNT_04965___ 51 GCTTATCGTG-GTGGTCTTTTTTATCAGTCTCAATTTGGGCGTTATCAAA 99
|||.|| .|| .|.||||||||||||||..|.||..||||.||.|||...
RBAM_030420__ 51 GCTCAT-ATGCATCGTCTTTTTTATCAGCTTAAACATGGGTGTGATCCGG 99
BSNT_04965___ 100 ATTGCACCGCTTAAAACGCTTCAGGTCTTTTTCGGCCAAGGAACGGCGCG 149
|||||.||.|||.|.|||||.|..|||||||||||.||.||....||.||
RBAM_030420__ 100 ATTGCGCCTCTTGATACGCTACGTGTCTTTTTCGGACAGGGGGATGCCCG 149
BSNT_04965___ 150 TGATGAACTTGTCTTATTTGAGTTCAGGCTGCCTCGGATCATCCTTTCTT 199
.|||.|.||.||.||||||||.|||||.|||||.||.||..|.||.||.|
RBAM_030420__ 150 GGATCAGCTCGTTTTATTTGAATTCAGACTGCCGCGCATGGTGCTGTCAT 199
BSNT_04965___ 200 TGCTTGTTGGAGCAGGGATCTCCGTAGCTGGAGCCATTTTGCAAAGCGTG 249
||||.||.||.||.||.|||.|.||..|.||.||.|||||.|||||||||
RBAM_030420__ 200 TGCTGGTCGGCGCCGGAATCGCGGTTTCAGGCGCGATTTTTCAAAGCGTG 249
BSNT_04965___ 250 TCTCAAAATGAACTT-GCCGAGCCTGGTATTCTCGGAATTAACGCCGGCG 298
|||||||||| |||| ||.|||||.||.||||||||.|||||||||||.|
RBAM_030420__ 250 TCTCAAAATG-ACTTGGCGGAGCCGGGCATTCTCGGTATTAACGCCGGGG 298
BSNT_04965___ 299 GTTCACTTGCTGTAGTGCTTTTTATATACTTTTTTCAAGGGTCAGCTTCA 348
..||..|.||.||.||.||.|||||.|.||||||||||||.||||||...
RBAM_030420__ 299 CGTCTTTGGCGGTCGTTCTGTTTATCTTCTTTTTTCAAGGATCAGCTGTT 348
BSNT_04965___ 349 GATCTCAGCTTTTTCGGAACATTTATGCTGCCATTCAGTGCTTTGGCAGG 398
|||.|.||..|...|||.||||...||||.||..|.||.||||||||.||
RBAM_030420__ 349 GATTTAAGTATGGCCGGTACATGGCTGCTTCCGGTGAGCGCTTTGGCGGG 398
BSNT_04965___ 399 AGCAATCCTCGCTGCGTTTCTCATTTATATTCTGGCATGGAAAAAAGGCG 448
.||..|.||.||||||.|.|||||.|||.|.|||||.|||||||||||||
RBAM_030420__ 399 GGCTTTTCTGGCTGCGCTGCTCATCTATGTGCTGGCTTGGAAAAAAGGCG 448
BSNT_04965___ 449 TGACACCGATTCGGCTGATTTTAGTCGGCATAGGGGTGAATGCCGGATTC 498
|..||||..|.|||||..||||.|||||.||.||.||.|||||.||.||.
RBAM_030420__ 449 TTTCACCTGTCCGGCTCGTTTTGGTCGGGATCGGCGTCAATGCGGGGTTT 498
BSNT_04965___ 499 AATGCCCTGTTGCTGATTTTTCAGCTTAAGATGGACCCTCATGATTTTAT 548
|||||.||..|..|||||||||||||.||.||||||||.|..|||||.||
RBAM_030420__ 499 AATGCGCTTCTCTTGATTTTTCAGCTGAAAATGGACCCGCGGGATTTCAT 548
BSNT_04965___ 549 GCAAGCCGC-GGTTTGGATATCCGGCTCAATATGGGGGGCGAACTGGAAT 597
|| ||.||| .||.|||||.|||||.||.||.|||...||.||.|||||.
RBAM_030420__ 549 GC-AGGCGCTTGTATGGATTTCCGGTTCGATTTGGAACGCCAATTGGAAA 597
BSNT_04965___ 598 ATGAT-CTGGGCGATTCTCCCTTGGATTGTGATCT--TGCTTCTGTTTAC 644
|||.| || |.|.|||.|.||.||| || ||.|||| |||||
RBAM_030420__ 598 ATGGTGCT-GTCCATTTTGCCGTGG--------CTGCTGGTTCT-TTTAC 637
BSNT_04965___ 645 --TT-----TATATAAGGCACGCTATTTGAACATTATGCAGCTCGGAGAC 687
|| |.|||||.||..|.|||||.||..|..|.||||||||.||.
RBAM_030420__ 638 CGTTCAGCCTCTATAAAGCCAGGTATTTAAATGTGCTTCAGCTCGGTGAT 687
BSNT_04965___ 688 CAATTGGCGACCGGGCTGGGCACCGCTGTTGAAAAGGAAAGACGGATTCT 737
||..|||||.|.|||||.||||||...|||||||||||..|.||..||||
RBAM_030420__ 688 CAGCTGGCGGCGGGGCTTGGCACCCGGGTTGAAAAGGAGCGGCGCGTTCT 737
BSNT_04965___ 738 TCTTCTGGCAGCGGTCACTCTTGCCGCTTCATGCGTGGCAGCTGCGGGGG 787
.||..||.|.||.||..|.||..||||.|||||.||.||.||.||.||.|
RBAM_030420__ 738 GCTGATGTCCGCCGTTGCCCTGACCGCGTCATGTGTTGCGGCAGCCGGCG 787
BSNT_04965___ 788 GCATTGCGTTTCTCGGATTGATCGCGCCGCATGTGGCTAGAAGGCTGACC 837
|.||.||.|||||||||.|.||.|||||||||.||||.||||||||.|||
RBAM_030420__ 788 GAATCGCTTTTCTCGGACTCATTGCGCCGCATTTGGCCAGAAGGCTTACC 837
BSNT_04965___ 838 GGTCCACGTCACCAGACGCTGATACCGGTCTCCGCCTTCATCGGCTCATT 887
||.||.||.|||||||||||.||.|||||.||.||.||.||||||.||||
RBAM_030420__ 838 GGGCCGCGCCACCAGACGCTTATCCCGGTTTCGGCTTTAATCGGCGCATT 887
BSNT_04965___ 888 CCTGTTTTTGCTTGCTGATACGCTGGCGAGAAATGTATTGGCACCATCAG 937
..|.|||.|||||||.||||||||||||||||||||..|.||.||.||.|
RBAM_030420__ 888 TTTATTTCTGCTTGCCGATACGCTGGCGAGAAATGTGCTTGCGCCGTCCG 937
BSNT_04965___ 938 AAATTCCGGTCGGACTTGTCATTTCCGTGCTAGGTGCGCCTTACTTTATT 987
||.||||.|||||.||.||.|||||||||||.||.|||||.||.|||.|.
RBAM_030420__ 938 AAGTTCCCGTCGGCCTGGTGATTTCCGTGCTCGGAGCGCCGTATTTTGTA 987
BSNT_04965___ 988 TATTTATTGATGAAAGCGAATTAG 1011
|||||..||||||||.||||.|||
RBAM_030420__ 988 TATTTGCTGATGAAAACGAAATAG 1011
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