Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04924 and RBAM_030210
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence dna-align/BSNT_04924___yvqC.1.9828.seq
# -bsequence dna-align/RBAM_030210___yvqC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04924___yvqC-RBAM_030210___yvqC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04924___yvqC-RBAM_030210___yvqC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04924___yvqC
# 2: RBAM_030210___yvqC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 641
# Identity: 511/641 (79.7%)
# Similarity: 511/641 (79.7%)
# Gaps: 13/641 ( 2.0%)
# Score: 2005.0
#
#
#=======================================
BSNT_04924___ 1 GTGATTCGAGTATTATTGATTGATGATCATGAAATGGTCAGAATGGGGCT 50
|||||||||||.|||.|||||||||||||||||||||||||.|||||.||
RBAM_030210__ 1 GTGATTCGAGTGTTACTGATTGATGATCATGAAATGGTCAGGATGGGTCT 50
BSNT_04924___ 51 CGCGGCTTTTTTGGAGGCGCAGCCCGATATTGAAGTCATCGGCGAAGCAT 100
.||.||.|||||.||.||.|||||.||.|||||||||..|||.|||||||
RBAM_030210__ 51 GGCCGCGTTTTTAGAAGCACAGCCGGACATTGAAGTCGCCGGTGAAGCAT 100
BSNT_04924___ 101 CGGAC-GGCAGCGAAGGTGTTCG-GCTTGCTGCGGAACTGTCGCCTGATG 148
|.||| |||||| |||...||| .||.||.||.||.||.|.|||.||||
RBAM_030210__ 101 CAGACGGGCAGC--AGGGCGTCGATCTGGCCGCAGAGCTTTTGCCGGATG 148
BSNT_04924___ 149 TCATTTTAATGGACCTTGTCATGGAGGGCATGGATGGCATTCAAGCTACA 198
|.|||||||||||||||||||||||.||||||||.|||||..||||.|||
RBAM_030210__ 149 TGATTTTAATGGACCTTGTCATGGACGGCATGGACGGCATCGAAGCGACA 198
BSNT_04924___ 199 AAGCAAATTTGCCGGGAGCTTTC--TGACCCGAAAATTATTGTGCTCACT 246
||.||.||.|| ||.|| |..|| ||||||||||||.||.|||||.||.
RBAM_030210__ 199 AAACAGATCTG-CGCGA-CACTCAATGACCCGAAAATCATCGTGCTGACG 246
BSNT_04924___ 247 AGCTTCATTGATGATGACAAAGTGTACCCGGTTATTGAAGCTGGCGCGCT 296
|||||.||||||||.|||||||||||.|||||.||.|||||.||.|||||
RBAM_030210__ 247 AGCTTTATTGATGACGACAAAGTGTATCCGGTGATCGAAGCGGGAGCGCT 296
BSNT_04924___ 297 CAGCTATCTGTTGAAAACCTCAAAAGCGGCAGAAATCGCCGATGCCATCC 346
|||||||.||.|||||||.||.||.|||||||||||.|||||.||||||.
RBAM_030210__ 297 CAGCTATTTGCTGAAAACGTCCAAGGCGGCAGAAATAGCCGAAGCCATCA 346
BSNT_04924___ 347 GCGCCGCAAGCAAGGGAGAGCCGAAGCTGGAGTCAAAAGTGGCGGGAAAA 396
|.||.||...||||||.||.||||||||.||.||.||.||||||||||||
RBAM_030210__ 347 GAGCGGCTGCCAAGGGCGAACCGAAGCTTGAATCGAAGGTGGCGGGAAAA 396
BSNT_04924___ 397 GTATTATCCAGGCTGCGCCACTCAGGTGAAAACGAGCTCCCTCATGAATC 446
||..|.||.|||||||||||.||| ||.||..||||.||.||||||.|
RBAM_030210__ 397 GTGCTGTCAAGGCTGCGCCATTCA---GAGAATCAGCTTCCGCATGAAAC 443
BSNT_04924___ 447 GCTTACGAAACGGGAGCTCGAAATACTCTTCCTGATCGCAGAAGGAAAGA 496
|||.||.|||.|.||.||.|||||.||||..||..||||.|||||.||||
RBAM_030210__ 444 GCTGACAAAAAGAGAACTGGAAATCCTCTGTCTCGTCGCGGAAGGCAAGA 493
BSNT_04924___ 497 CAAACAAAGAAATAGGCGAGGAACTGTTTATTACGATTAAAACAGTCAAA 546
|.||.|||||.||.||.||.||.|||||.||||||||||||||.||.|||
RBAM_030210__ 494 CGAATAAAGAGATTGGTGAAGAGCTGTTCATTACGATTAAAACGGTGAAA 543
BSNT_04924___ 547 ACACATATTACCAATATTTTATCAAAGCTGGATGTCAGTGACCGGACGCA 596
||.||.|||||.|||||.||.||||||||.||||||||||||||.|||||
RBAM_030210__ 544 ACCCACATTACGAATATATTGTCAAAGCTTGATGTCAGTGACCGCACGCA 593
BSNT_04924___ 597 GGCGGCGGTGTACGCACACCGAAATCATCTCGTGA-ATTAG 636
|||.||.||.||.||.|||||.||||||||||||| ||.|
RBAM_030210__ 594 GGCAGCCGTATATGCCCACCGCAATCATCTCGTGACATAA- 633
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