Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04918 and RBAM_030160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence dna-align/BSNT_04918___fumC.1.9828.seq
# -bsequence dna-align/RBAM_030160___fumC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04918___fumC-RBAM_030160___fumC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04918___fumC-RBAM_030160___fumC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04918___fumC
# 2: RBAM_030160___fumC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1391
# Identity: 1144/1391 (82.2%)
# Similarity: 1144/1391 (82.2%)
# Gaps: 4/1391 ( 0.3%)
# Score: 4717.5
#
#
#=======================================
BSNT_04918___ 1 ATGGAATACAGAATTGAACGAGACACCATGGGAGAAGTAAAAGTTCCTGC 50
|||||.||||||||||||..||||||||||||||||||.||||||||.||
RBAM_030160__ 1 ATGGACTACAGAATTGAAAAAGACACCATGGGAGAAGTTAAAGTTCCGGC 50
BSNT_04918___ 51 TGATAAATTTTGGGGCGCCCAAACACAGCGAAGCAAGGAGAACTTTAAGA 100
.|||||||||||||||||.||.||||||||.|||||.||||||||.||.|
RBAM_030160__ 51 AGATAAATTTTGGGGCGCTCAGACACAGCGCAGCAAAGAGAACTTCAAAA 100
BSNT_04918___ 101 TCGGTTCTGAAAAAATGCCGATGCGTGTTGTGAAGGCGTTTGCAATCTTA 150
|||||||.|||||||||||...||||||||||||||||||||||||.||.
RBAM_030160__ 101 TCGGTTCAGAAAAAATGCCTCAGCGTGTTGTGAAGGCGTTTGCAATATTG 150
BSNT_04918___ 151 AAACGAAGCACTGCTCTAGCTAATAAACGCCTCGGCAATCTGGATGCTGA 200
|||||||||||.||..|.||.||..|||||||||||||..|.||..||||
RBAM_030160__ 151 AAACGAAGCACAGCGATCGCCAACGAACGCCTCGGCAACTTAGAGTCTGA 200
BSNT_04918___ 201 AAAAGCAGAAGCGATTGCAGCGGTTTGTGATGATGTGCTCAAAGGCAAGT 250
|||||||.|.||||||||.||.||.|||||.|||||..|.||.|||||.|
RBAM_030160__ 201 AAAAGCACAGGCGATTGCCGCTGTATGTGACGATGTTTTAAACGGCAAAT 250
BSNT_04918___ 251 ACGATGACAACTTCCCGCTTGTCGTATGGCAGACCGGAAGCGGCACACAA 300
||||.||.|||||.|||||.||.||.||||||||.|||||||||||.|||
RBAM_030160__ 251 ACGACGATAACTTTCCGCTCGTTGTCTGGCAGACGGGAAGCGGCACGCAA 300
BSNT_04918___ 301 AGCAATATGAACATGAACGAAGTGGTAGCCAACCGTGCGACTGCTTTATT 350
|||||.|||||.|||||.||||||||.||||||||.||||||||||||||
RBAM_030160__ 301 AGCAACATGAATATGAATGAAGTGGTGGCCAACCGCGCGACTGCTTTATT 350
BSNT_04918___ 351 AAAAGAGAAGAACTCTGATCAAACGATTCATCCAAATGATGACGTGAACC 400
.|||||.||.||.||.||.|..|.|||||||||.|||||||||||.||||
RBAM_030160__ 351 GAAAGAAAAAAATTCCGAGCTGAAGATTCATCCGAATGATGACGTCAACC 400
BSNT_04918___ 401 GAAGCCAAAGCTCAAACGACACATTCCCGACTGCGATGCATGTTGCCGCT 450
|.|||||||||||||||||.|||||||||||.||||||||.|||||.||.
RBAM_030160__ 401 GCAGCCAAAGCTCAAACGATACATTCCCGACGGCGATGCACGTTGCTGCG 450
BSNT_04918___ 451 GTTTTGGCTGTTTACGAGCAGCTTGTGCCAGCGCTTGATCAGCTTCGCAA 500
|||.|.||.||.||.||||||||.||.||.||||||||||||||.|||..
RBAM_030160__ 451 GTTCTTGCCGTATATGAGCAGCTCGTTCCGGCGCTTGATCAGCTGCGCGC 500
BSNT_04918___ 501 TACACTGGATGAAAAAGCAAAAGCATACAATGATATTGTCAAAATCGGAC 550
.||.||.|||||||||||.|||||.||..|.||||||||.||||||||||
RBAM_030160__ 501 GACGCTTGATGAAAAAGCGAAAGCTTATCAGGATATTGTGAAAATCGGAC 550
BSNT_04918___ 551 GCACACATCTTCAGGATGCTACGCCACTGACCCTCGGACAGGAAATCAGC 600
||||.|||.|.|||||.||.||.||.|||||.||||||||||||||||||
RBAM_030160__ 551 GCACGCATTTGCAGGACGCCACTCCGCTGACGCTCGGACAGGAAATCAGC 600
BSNT_04918___ 601 GGATGGGTTCACATGCTGGACCGTTCGAAGGAAATGATTTTGGAAGCGAC 650
||.|||||..|||||||.|||||||||||.|||||||||.|.||..|.||
RBAM_030160__ 601 GGCTGGGTATACATGCTTGACCGTTCGAAAGAAATGATTCTTGAGTCAAC 650
BSNT_04918___ 651 AGATAAAATGCGTGCGCTTGCAATTGGTGGAACGGCTGTCGGAACAGGTA 700
.||.|||||.||.||||||||.||.||.||.|||||.|||||.||.||.|
RBAM_030160__ 651 GGAAAAAATCCGCGCGCTTGCCATCGGAGGCACGGCAGTCGGCACGGGAA 700
BSNT_04918___ 701 TCAACGCCCACCCAGAGTTTGGAGAGCTTGTCTCAGAAGAGATCACTAAG 750
||||||||||.||..||||.||.||..|.|||.|.|||||.|||||.||.
RBAM_030160__ 701 TCAACGCCCATCCGCAGTTCGGTGAATTCGTCGCGGAAGAAATCACAAAA 750
BSNT_04918___ 751 CTGACCGGCCAAACGTTCAGCAGCTCCCCGAATAAATTCCACGCGCTGAC 800
.|.||.||.||.||.||||..||.||.||.||.||||||||.|||||.||
RBAM_030160__ 751 GTAACGGGGCAGACATTCAAGAGTTCTCCTAACAAATTCCATGCGCTCAC 800
BSNT_04918___ 801 AAGCCATGACGAAATCACTTATGTGCATGGCGCATTAAAAGCGCTTGCGG 850
|||||||||.|||||||||.|.||.||.|||||.||||||||..|.||.|
RBAM_030160__ 801 AAGCCATGATGAAATCACTCACGTTCACGGCGCGTTAAAAGCATTGGCTG 850
BSNT_04918___ 851 CTGACTTAATGAAAATCGCGAACGATGTCAGATGGCTCGCAAGCGGACCT 900
|.|||.|.|||||.||.||.|||||||||||||||||.||||||||.||.
RBAM_030160__ 851 CCGACCTGATGAAGATTGCCAACGATGTCAGATGGCTGGCAAGCGGCCCG 900
BSNT_04918___ 901 CGCTGCGGCATCGGGGAGATCGTCATTCCTGAAAATGAGCCGGGAAGCTC 950
||||||||.|||||.||.|||||||||||||||||||||||||||||.||
RBAM_030160__ 901 CGCTGCGGAATCGGCGAAATCGTCATTCCTGAAAATGAGCCGGGAAGTTC 950
BSNT_04918___ 951 TATTATGCCTGGTAAAGTCAACCCGACACAAAGCGAAGCGTTAACAATGA 1000
|||.|||||.||.||||||||||||||.|||||.||.|||.|.|||||||
RBAM_030160__ 951 TATCATGCCGGGCAAAGTCAACCCGACGCAAAGTGAGGCGCTGACAATGA 1000
BSNT_04918___ 1001 TCGCAGCGCAAATCATGGGGAACGATGCTACAATCGGCTTTGCTGCGAGT 1050
||||.||||||.|.|||||.||.||.||.||||||||.|||||.||.||.
RBAM_030160__ 1001 TCGCCGCGCAAGTGATGGGAAATGACGCGACAATCGGATTTGCGGCCAGC 1050
BSNT_04918___ 1051 CAGGGAAACTTTGAACTGAACGTGTTTAAGCCTGTTATCATTTACAACTT 1100
||.||||||||.||.|||||.||.||.||.||.|||||.||.||.|||||
RBAM_030160__ 1051 CAAGGAAACTTCGAGCTGAATGTCTTCAAACCGGTTATTATCTATAACTT 1100
BSNT_04918___ 1101 CCTGCAATCTGTGCAGCTGCTCAGTGACGGCATGAATTCATTCCATGATA 1150
||||||..|.||||||||||||||||||||.||||||||.||||||||.|
RBAM_030160__ 1101 CCTGCAGACCGTGCAGCTGCTCAGTGACGGAATGAATTCCTTCCATGACA 1150
BSNT_04918___ 1151 AATGTGCTGTCGGTATTGAGCCTAATAAAGAAACCATTCAGGAAAACCTG 1200
||||.|||||||||||||||||.||..||||.||.|||||||||||.||.
RBAM_030160__ 1151 AATGCGCTGTCGGTATTGAGCCGAACCAAGAGACGATTCAGGAAAATCTC 1200
BSNT_04918___ 1201 TCAAATTCATTAATGCTTGTTACGGCGCTGAACCCGCATATCGGTTATGA 1250
||.||.|||||||||||||||||||||||.||||||||.|||||||||||
RBAM_030160__ 1201 TCTAACTCATTAATGCTTGTTACGGCGCTTAACCCGCACATCGGTTATGA 1250
BSNT_04918___ 1251 AAACGCGGCGAAAATCGCCAAGCTTGCCCATAAAGAGGGATTGACGCTCA 1300
||||||.|||||||||||||||||||||||.|||||.||..|||||||.|
RBAM_030160__ 1251 AAACGCCGCGAAAATCGCCAAGCTTGCCCACAAAGAAGGCCTGACGCTGA 1300
BSNT_04918___ 1301 AAGAAGCAGCTTTGAAGCTTGAA--TTGCTGACAGAGGAGCAATTTAACG 1348
|||||||.||.||..||| |||| || ||||||||.||.||||||||.|
RBAM_030160__ 1301 AAGAAGCGGCATTACAGC-TGAACCTT-CTGACAGAAGAACAATTTAATG 1348
BSNT_04918___ 1349 AAATGGTTAAGCCGGAAGACATGGTAAAACCAAAGGCGTAA 1389
|||||||....||||||||.|||||..|.||.||.||.|||
RBAM_030160__ 1349 AAATGGTGCGTCCGGAAGATATGGTGCACCCGAAAGCATAA 1389
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