Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04917 and RBAM_030150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:27
# Commandline: needle
# -asequence dna-align/BSNT_04917___yuxN.1.9828.seq
# -bsequence dna-align/RBAM_030150___yuxN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04917___yuxN-RBAM_030150___yuxN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04917___yuxN-RBAM_030150___yuxN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04917___yuxN
# 2: RBAM_030150___yuxN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 896
# Identity: 648/896 (72.3%)
# Similarity: 648/896 (72.3%)
# Gaps: 40/896 ( 4.5%)
# Score: 2274.0
#
#
#=======================================
BSNT_04917___ 1 TTGAAGGAAAAAGAAAAACTGATTATTGAAACAGCCTTAAAACTATTTGC 50
|||||||||||||||||.|||||.||||||.||||..|.|||||.|||||
RBAM_030150__ 1 TTGAAGGAAAAAGAAAAGCTGATCATTGAAGCAGCAATTAAACTGTTTGC 50
BSNT_04917___ 51 CCAAAAAGGATACAACTCAACATCAGTTCAGGAAATCGCAAAAGAATGCA 100
||.||||||.|||||.||.|||||.||||||||||||||..|.|||||||
RBAM_030150__ 51 CCGAAAAGGGTACAAATCTACATCGGTTCAGGAAATCGCCGATGAATGCA 100
BSNT_04917___ 101 AAATATCTAAAGGCGCTTTTTATATTTATTTTCCTTCGAAAGAAGCGCTT 150
||||.||.|||||||||||||||.|.||.||||||||.||||||||.||.
RBAM_030150__ 101 AAATCTCAAAAGGCGCTTTTTATCTATACTTTCCTTCCAAAGAAGCACTG 150
BSNT_04917___ 151 CTTCTCTCTATGCTGAACTACTATTATGATAAAACGTTTACCCGAATTTT 200
|||||.||.||||||||.|||||.|||||||||||||||||||||||...
RBAM_030150__ 151 CTTCTATCCATGCTGAATTACTACTATGATAAAACGTTTACCCGAATCAC 200
BSNT_04917___ 201 AAATATTAAAACGAAGGGCGACAGCCCCAGAACGGCTTACCGTAAACAGC 250
.|..||..|||||.||||.|||||.||.|||.|.|||||||..|||||||
RBAM_030150__ 201 GACGATCCAAACGGAGGGTGACAGTCCGAGAGCTGCTTACCAAAAACAGC 250
BSNT_04917___ 251 TGACCGTCCTCTATGAAAACATTCTTGAACACAAAGATTTTATCAGCATG 300
|..|.||..|.||.|||...|||||.|..||..|.||||||||.|.|.||
RBAM_030150__ 251 TTGCGGTGTTTTACGAATCGATTCTCGCCCATCAGGATTTTATTACCGTG 300
BSNT_04917___ 301 CAGTTGAAGGAGGGTTCTCTGCCTTACACAGAAGAAGTGGAGCAATGCGC 350
|||.||||.||.|||||.||.|||||.||.|||||||.||.|||.||||.
RBAM_030150__ 301 CAGATGAAAGACGGTTCACTTCCTTATACCGAAGAAGCGGCGCAGTGCGG 350
BSNT_04917___ 351 AAAAAAGATCCGCCAGTC-CTCACTTCAATTTCATATCGACAGCCTGCTG 399
|||.|..|||||||.||| .|| ||.||.||||||||||||||.||.||.
RBAM_030150__ 351 AAAGAGAATCCGCCGGTCGATC-CTGCAGTTTCATATCGACAGTCTTCTT 399
BSNT_04917___ 400 AACATCTATGGAAAAAAAGCGGAACCGTACACTGCTGAGCTTTGTTTTTT 449
...||.||.|||.|||||||.|||||.|||||.||.||||||||||||||
RBAM_030150__ 400 GCGATTTACGGAGAAAAAGCTGAACCATACACAGCCGAGCTTTGTTTTTT 449
BSNT_04917___ 450 AATAGAGGGCATCAGCCAGATTTACCTGGAGTGCATGATTTTGCTCGG-- 497
||||||.||.|||||.|||||.||.||.||.|...|.|||.||..|||
RBAM_030150__ 450 AATAGAAGGAATCAGTCAGATGTATCTTGAATATCTCATTCTGACCGGCC 499
BSNT_04917___ 498 -----GTACACTGTGAAGCCGTCTCAATTAGCTGATATCATTATGAATCG 542
|||| ||||.||.|..||.||..|||.|.|.||..|..|
RBAM_030150__ 500 GGTCCGTAC-------AGCCTTCGCTTTTGGCAAATACCGTGATTCACAG 542
BSNT_04917___ 543 AATTGATGATATGGTAAAAGGCATGTCTGAACGAAACGAT-AAGCCTTTC 591
|||||||||.||.|||||.||.|||.|.||..||.|.||| ||||.|||
RBAM_030150__ 543 AATTGATGACATCGTAAACGGAATGGCGGACAGACATGATGAAGCGTTT- 591
BSNT_04917___ 592 ATCACATTGGAAGAGGCGAGCTCTTTATTCGGGCCTCTTACGCACGGACG 641
||..|..|.||.|||||.|||||..|.||.||.||.|||....||||.|.
RBAM_030150__ 592 ATTTCTCTTGATGAGGCAAGCTCACTGTTTGGCCCCCTTCATAACGGGCA 641
BSNT_04917___ 642 GCCTGACCCGCTGACTGAATCGATTGTGAAAAGCCTACG---------TG 682
|||.||.||..|.|...|||||||..||.|.|.|||.|| .|
RBAM_030150__ 642 GCCCGATCCTTTAAGCCAATCGATCTTGCAGACCCTCCGCACGCGCATCG 691
BSNT_04917___ 683 ACAAAATTAACAGCTTAAACACAAAC-TCCTCTCTTGAATTATCGGAGAG 731
.||..||..||| |.||.|||.| || ||||||..|.|||||
RBAM_030150__ 692 GCACGATGGACA----AGACGCAAGCATC------TGAATTCACCGAGAG 731
BSNT_04917___ 732 CTTGGACATACTTGAAGCAGAAATGAAGAAAAAAACACCGAAGCTGGCGA 781
||||||.||.||.||||||||||||||||||||..|.|||||.|.|||.|
RBAM_030150__ 732 CTTGGATATTCTGGAAGCAGAAATGAAGAAAAAGTCGCCGAAACCGGCAA 781
BSNT_04917___ 782 TCATAAAAGGAATGATTCATAATCTGACGGAGTCTGAAGCT-CTCGCCAA 830
||||.||||||||||||...|||.|||.|||.||.| |.|| ||.||..|
RBAM_030150__ 782 TCATCAAAGGAATGATTTTGAATTTGAAGGAATCCG-ACCTGCTGGCTGA 830
BSNT_04917___ 831 AGATGCGGAGCAGCTTAAATATTTATTAAAACAGCAACATATTTAG 876
||||||.||.|||||.|.||.||||.|.||||||||...|||||||
RBAM_030150__ 831 AGATGCAGAACAGCTCAGATTTTTACTGAAACAGCAGTTTATTTAG 876
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