Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04854 and RBAM_029820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:23
# Commandline: needle
# -asequence dna-align/BSNT_04854___yusB.1.9828.seq
# -bsequence dna-align/RBAM_029820___yusB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04854___yusB-RBAM_029820___yusB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04854___yusB-RBAM_029820___yusB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04854___yusB
# 2: RBAM_029820___yusB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 532/670 (79.4%)
# Similarity: 532/670 (79.4%)
# Gaps: 2/670 ( 0.3%)
# Score: 2096.0
#
#
#=======================================
BSNT_04854___ 1 ATGTTTGAAAAATACTTCCCGAACGTTGATTTAACTGAATTATGGAACGC 50
|||||||||||||..|||||||||||||||.||||.||..|.||||..||
RBAM_029820__ 1 ATGTTTGAAAAATGGTTCCCGAACGTTGATATAACCGAGCTGTGGACGGC 50
BSNT_04854___ 51 GACATATGAAACACTTTATATGACGCTGATTTCTTTACTGTTTGCTTTTG 100
.|||||.||.||.||||||||||||.|.||..|.|||.|.|||.|.||||
RBAM_029820__ 51 CACATACGAGACCCTTTATATGACGGTCATCGCATTAGTTTTTTCATTTG 100
BSNT_04854___ 101 TCATCGGGGTCATCCTCGG-CTTGCTGCTCTTTCTGACGAGCAAAGGAAG 149
|||||||.|..||.||||| ||| |||||||||.|.|||.||||.|||||
RBAM_029820__ 101 TCATCGGAGCGATTCTCGGTCTT-CTGCTCTTTTTAACGGGCAAGGGAAG 149
BSNT_04854___ 150 CCTCTGGCAGAATAAAGCGGTCAACTCTGTGATTGCGGCCGTTGTTAACA 199
|.|.|||.|.||||||....|.|||.|.|||||||||||.||.|||||.|
RBAM_029820__ 150 CTTATGGGAAAATAAAATCATTAACACCGTGATTGCGGCGGTCGTTAATA 199
BSNT_04854___ 200 TATTCAGATCGATTCCGTTCCTTATTTTAATTATTTTACTATTAGGTTTT 249
|.|||||.||.||||||||.|||||||||||||||.|.||..|.||.|||
RBAM_029820__ 200 TTTTCAGGTCTATTCCGTTTCTTATTTTAATTATTCTGCTTCTCGGCTTT 249
BSNT_04854___ 250 ACGAAATTTTTAGTCGGCACGATCTTAGGGCCAAACGCCGCTTTGCCGGC 299
||.||..||||.|||||..||||.|||||.||.||||||||.||||||||
RBAM_029820__ 250 ACTAAGATTTTGGTCGGATCGATTTTAGGACCGAACGCCGCATTGCCGGC 299
BSNT_04854___ 300 GCTGGTAATCGGCTCGGCACCATTTTACGCGCGCCTTGTTGAAATCGCGC 349
||||.|.||||||||.||.||.||||||||.||.||||..|||||.||||
RBAM_029820__ 300 GCTGATTATCGGCTCCGCGCCGTTTTACGCCCGTCTTGCGGAAATTGCGC 349
BSNT_04854___ 350 TGCGTGAGGTGGATAAAGGTGTGATTGAAGCCGCTAAATCAATGGGCGCG 399
|.||.||.||.||||||||.||.||.|||||.||.|.|||||||||.||.
RBAM_029820__ 350 TCCGGGAAGTCGATAAAGGAGTCATCGAAGCTGCCAGATCAATGGGAGCA 399
BSNT_04854___ 400 AAAACGTCTACGATTATTTTCAAAGTGTTGATTCCGGAATCAATGCCTGC 449
||.||.||.||||||||.|||||||||.|||||||.||||||||||||||
RBAM_029820__ 400 AAGACATCGACGATTATCTTCAAAGTGCTGATTCCTGAATCAATGCCTGC 449
BSNT_04854___ 450 TCTTATTTCTGGCATTACGGTTACTGCCATCGCTTTGATCGGCTCAACGG 499
|.|.|||||.|||||.||.|||||.||||||||..|||||||.||.||.|
RBAM_029820__ 450 TTTAATTTCAGGCATCACCGTTACAGCCATCGCCCTGATCGGATCTACCG 499
BSNT_04854___ 500 CAATTGCCGGAGCCATTGGTTCAGGAGGCCTTGGAAACCTTGCGTACGTA 549
|.||||||||.|||||.||||||||.||.||.|||||||||||.||.|||
RBAM_029820__ 500 CCATTGCCGGCGCCATCGGTTCAGGCGGACTCGGAAACCTTGCATATGTA 549
BSNT_04854___ 550 GAAGGATATCAGTCTAATAACGCTGATGTTACCTTCGTTGCTACTGTGTT 599
|||||.||.|||||.|||||..|.|||||.||.||.||.||.||.||.||
RBAM_029820__ 550 GAAGGCTACCAGTCCAATAATACGGATGTAACGTTTGTAGCGACAGTATT 599
BSNT_04854___ 600 TATTTTAATCATCGTGTTTATTATTCAAATCATCGGTGATCTAATAACAA 649
|||..|.||||||||.|||||.|||||.||.|||||||||.|.||.||||
RBAM_029820__ 600 TATACTCATCATCGTCTTTATCATTCAGATTATCGGTGATGTGATTACAA 649
BSNT_04854___ 650 ATATTATAGACAAACGATAA 669
||||.|||||||||.|||||
RBAM_029820__ 650 ATATAATAGACAAAAGATAA 669
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