Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04821 and RBAM_029600
See
Amino acid alignment /
Visit
BSNT_04821 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:21
# Commandline: needle
# -asequence dna-align/BSNT_04821___yurI.1.9828.seq
# -bsequence dna-align/RBAM_029600___bsn.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04821___yurI-RBAM_029600___bsn.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04821___yurI-RBAM_029600___bsn.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04821___yurI
# 2: RBAM_029600___bsn
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 906
# Identity: 659/906 (72.7%)
# Similarity: 659/906 (72.7%)
# Gaps: 75/906 ( 8.3%)
# Score: 2360.5
#
#
#=======================================
BSNT_04821___ 1 ATGACAAAAAAAGCATGGTTTCTGCCGCTCGTCTG--TGTATTACTGATT 48
||||||||||||...||||||||||||.|.||||| |||.|| |.|||
RBAM_029600__ 1 ATGACAAAAAAACTTTGGTTTCTGCCGATTGTCTGCCTGTTTT--TCATT 48
BSNT_04821___ 49 TCCGGATGGCTTGCGCCTGCAGCTTCAGCAAGCGCGCAAACCG-----CA 93
|..||||||...|||||..||||.||.||..||||| ||| ||
RBAM_029600__ 49 TTTGGATGGGCCGCGCCGTCAGCCTCTGCGGGCGCG----CCGGCTGACA 94
BSNT_04821___ 94 TTAAGCCTTAATGACCGATTGGCGTCTTCCCCTTCTGGAACAGGAAGCCT 143
..||.|..||..| |||..|||||..|||..||.|.|| .||.| |.
RBAM_029600__ 95 CGAATCTGTACAG-CCGGATGGCGGTTTCAACTGCCGG---CGGCA--CA 138
BSNT_04821___ 144 TCTCTCATT-----AGCCGCCCCCGCTG------CACCCTATGCTGACAC 182
.||||..|| |.|.|||.|.|||| |.||.|.|||.||.||
RBAM_029600__ 139 ACTCTTTTTCCGCAAACTGCCTCAGCTGTCATCACTCCGTCTGCGGATAC 188
BSNT_04821___ 183 AGATACCTATTATGAAGGGGCTGAAGGTAAAACAGG---AGACTCGCTAA 229
.||.||.|||||..|||..|||...||.||||..|| ||.|| |||
RBAM_029600__ 189 GGACACATATTACAAAGAAGCTTCCGGAAAAAGCGGAACAGCCT---TAA 235
BSNT_04821___ 230 AAAGCACCCTGCACCGCATTATCAGCGGACACACGATGCTGTCCTACAGC 279
|.|||.|||||||||||||.|||||||||||.||.|.||||||.||||||
RBAM_029600__ 236 AGAGCGCCCTGCACCGCATCATCAGCGGACATACAAAGCTGTCTTACAGC 285
BSNT_04821___ 280 GAAGTGTGGAACGCGCTGAAAGAAACGGATGAAGATCCGAGAAATCCGAA 329
.||||.|||||.||..||||.|||||.||.|||||||||..|||.|||||
RBAM_029600__ 286 CAAGTATGGAATGCATTGAAGGAAACTGACGAAGATCCGGCAAACCCGAA 335
BSNT_04821___ 330 TAACGTCATCCTGCTCTATACGAATGAATCGCGGTCCAAAAACCTG---- 375
.||.||||||.||||||||||..|.|||||.|||.|||||| |
RBAM_029600__ 336 CAATGTCATCTTGCTCTATACCCAGGAATCACGGGCCAAAA----GTAAA 381
BSNT_04821___ 376 AACGGCGGCAATGTCGGCGATTGGAACCGCGAGCATGTCTGGGCGAAATC 425
||||||||||..|||||.||.||||||||.||.||.||.|||||.||.||
RBAM_029600__ 382 AACGGCGGCAGCGTCGGGGACTGGAACCGTGAACACGTGTGGGCAAAGTC 431
BSNT_04821___ 426 CCATGGCGATTTTGGCACGAGCAAG-----GGACCTGGTACTGATATTCA 470
.||.||..|.||.||.|| || ||.|||||.||.||.|||||
RBAM_029600__ 432 ACACGGAAACTTCGGAAC-----AGCTGCCGGCCCTGGGACGGACATTCA 476
BSNT_04821___ 471 TCATTTGCGCCCGGCTGATGTTCAAGTTAACAGCGCCAGAGGAAATATGG 520
||||.|||||||.||.||.||.||.||.|||||.|||||||||||.||||
RBAM_029600__ 477 TCATCTGCGCCCTGCGGACGTCCAGGTGAACAGTGCCAGAGGAAACATGG 526
BSNT_04821___ 521 ATTTTGACAATGGCGGCACTGAATATGCGAAGGCACCCGGAAATTATTAT 570
|||||||.||.||||||.|.|||||..||||.||.||.||.||||||||.
RBAM_029600__ 527 ATTTTGATAACGGCGGCTCAGAATACCCGAAAGCGCCGGGCAATTATTAC 576
BSNT_04821___ 571 GACGGCGATTCATGGGAGCCCCGCGATGATGTGAAAGGCGATGTTGCCCG 620
|||||.|||||.||||||||.||||||||.||.|||||.|||||.|||||
RBAM_029600__ 577 GACGGTGATTCCTGGGAGCCGCGCGATGAGGTCAAAGGAGATGTCGCCCG 626
BSNT_04821___ 621 CATGCTGTTTTACATGGCTGTCCGTTACGAGGGTGATGACGGCTATCCTG 670
|||||||.||||||||||.||.|||||.||.||.||.|||||.|||||||
RBAM_029600__ 627 CATGCTGCTTTACATGGCGGTGCGTTATGAAGGAGACGACGGGTATCCTG 676
BSNT_04821___ 671 ATCTTGAGCTTAATGATAAGACAGGCAACGGCTCAGCTCCTTATCATGGC 720
|.||||||||.||||||||.||.||.||||||||||||||||| |||||.
RBAM_029600__ 677 ACCTTGAGCTGAATGATAAAACCGGAAACGGCTCAGCTCCTTA-CATGGG 725
BSNT_04821___ 721 AAACAATCTGTCC----TGCTCGAATGGAATAAGCAGGATCCGGTTGACG 766
| ||.|||||| |||||.||||||||.|.||.||.||.|| ||
RBAM_029600__ 726 A---AAACTGTCCGTTTTGCTCAAATGGAATCAACAAGACCCCGT---CG 769
BSNT_04821___ 767 ACCGCGAGCGGAAAA-----GAAATGAAATCATTTATGAAAAATATCAGC 811
||.|..| |||||| |.||.|||||||||||.|||.|.|||||||
RBAM_029600__ 770 ACAGTAA--GGAAAAACGGCGGAACGAAATCATTTACGAAGACTATCAGC 817
BSNT_04821___ 812 ACAACCGCAATCCATTTATCGACCACCCTGAATGGGCGGATGAGATTTGG 861
|.|||||||||||.|||||||||||.||.|||||||||||.||.||.||
RBAM_029600__ 818 ATAACCGCAATCCGTTTATCGACCATCCGGAATGGGCGGACGAAATCTG- 866
BSNT_04821___ 862 CCGTAA 867
||||
RBAM_029600__ 867 --GTAA 870
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.