Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04774 and RBAM_029370

See Amino acid alignment / Visit BSNT_04774 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_04774___hom.1.9828.seq
#    -bsequence dna-align/RBAM_029370___hom.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04774___hom-RBAM_029370___hom.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04774___hom-RBAM_029370___hom.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04774___hom
# 2: RBAM_029370___hom
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1302
# Identity:    1063/1302 (81.6%)
# Similarity:  1063/1302 (81.6%)
# Gaps:           0/1302 ( 0.0%)
# Score: 4359.0
# 
#
#=======================================

BSNT_04774___      1 TTGAAAGCGATTCGTGTAGGGCTTTTAGGTTTAGGTACCGTCGGAAGCGG     50
                     |||.|||||||||||.|.||.||.|||||..|.||.|||||.||||||||
RBAM_029370__      1 TTGGAAGCGATTCGTATTGGACTGTTAGGACTGGGAACCGTGGGAAGCGG     50

BSNT_04774___     51 TGTCGTTAAAATTATTCAAGACCATCAGGATAAGCTTATGCATCAGGTCG    100
                     .|||||.||||||||.|||||.||||||||||||||||||||.|||||||
RBAM_029370__     51 AGTCGTCAAAATTATACAAGATCATCAGGATAAGCTTATGCACCAGGTCG    100

BSNT_04774___    101 GCTGTCCGGTTACGATAAAAAAAGTGCTTGTAAAAGATTTAGAGAAAAAG    150
                     ||||||||||.|||||.|||||||||||.||.||||||.|.||.|||||.
RBAM_029370__    101 GCTGTCCGGTGACGATCAAAAAAGTGCTAGTTAAAGATATTGATAAAAAA    150

BSNT_04774___    151 AGAGAAGTAGATTTGCCGAAGGAAGTGCTCACGACAGAAGTGTATGATGT    200
                     .||||.|.|||..|||||||.||||||||.|||||||||||.||||||||
RBAM_029370__    151 CGAGACGCAGACCTGCCGAAAGAAGTGCTGACGACAGAAGTCTATGATGT    200

BSNT_04774___    201 CATTGATGATCCAGATGTTGATGTCGTCATCGAGGTGATCGGCGGCGTTG    250
                     .||.|||||.||.||.||.||.||..|.||.||.||.||||||||.||.|
RBAM_029370__    201 GATCGATGACCCTGAAGTCGACGTGATTATTGAAGTCATCGGCGGTGTCG    250

BSNT_04774___    251 AACAGACAAAACAATATTTGGTCGACGCGCTGAGATCGAAAAAGCATGTT    300
                     |||||||.||.||||||.|..|.||.||..|||.|.|||||||.||||||
RBAM_029370__    251 AACAGACGAAGCAATATCTTCTTGATGCCTTGAAAGCGAAAAAACATGTT    300

BSNT_04774___    301 GTCACAGCAAACAAGGACTTAATGGCTGTGTACGGCTCCGAGCTGCTTGC    350
                     ||.||.|||||.||.||..|.||.||.||.||.|||||.|||||..|.||
RBAM_029370__    301 GTGACCGCAAATAAAGATCTGATCGCCGTATATGGCTCAGAGCTTTTAGC    350

BSNT_04774___    351 CGAAGCGAAGGAAAATGGATGCGATATCTACTTTGAAGCCAGTGTTGCCG    400
                     ||..||.|||||||||||.||.||..|.||.|.||||||.|||||.||||
RBAM_029370__    351 CGCCGCAAAGGAAAATGGCTGTGACTTGTATTATGAAGCGAGTGTCGCCG    400

BSNT_04774___    401 GCGGGATTCCGATTCTGCGCACGTTAGAGGAAGGCCTCTCATCAGATCGA    450
                     ||||.||.||||||.|.||||||.|.||.||||||||.||.||.||.||.
RBAM_029370__    401 GCGGAATCCCGATTTTACGCACGCTCGAAGAAGGCCTTTCCTCTGACCGG    450

BSNT_04774___    451 ATTACAAAAATGATGGGAATTGTGAACGGCACAACAAACTTTATCTTAAC    500
                     ||.|||||||||||||||||.||.|||||.||.||.|||||.||||||||
RBAM_029370__    451 ATCACAAAAATGATGGGAATCGTCAACGGAACGACGAACTTCATCTTAAC    500

BSNT_04774___    501 CAAAATGATCAAAGAGAAAAGCCCATACGAGGAAGTGCTCAAGGAAGCGC    550
                     .||||||||.|||||.||||||||.||.||.||||||||.||||||||||
RBAM_029370__    501 GAAAATGATTAAAGAAAAAAGCCCGTATGAAGAAGTGCTGAAGGAAGCGC    550

BSNT_04774___    551 AGGATCTCGGTTTTGCCGAAGCTGATCCGACTTCTGACGTGGAAGGGCTT    600
                     ||||||||||.||.||.|||||.||.|||||..|.||.||.||||||||.
RBAM_029370__    551 AGGATCTCGGATTCGCGGAAGCGGACCCGACCGCCGATGTAGAAGGGCTC    600

BSNT_04774___    601 GACGCCGCACGGAAAATGGCGATATTGGCGCGCCTCGGCTTCTCGATGAA    650
                     ||.|||||.||.||.||||||||.||.||.||.|||||||||||.|||||
RBAM_029370__    601 GATGCCGCGCGCAAGATGGCGATTTTAGCCCGTCTCGGCTTCTCTATGAA    650

BSNT_04774___    651 CGTGGATCTGGAAGACGTCAAAGTAAAGGGGATCTCCCAAATTACAGACG    700
                     .||.||||||||.||.|||||||||||.||.||.||||..||.||.||.|
RBAM_029370__    651 TGTCGATCTGGACGATGTCAAAGTAAAAGGAATTTCCCGGATAACGGATG    700

BSNT_04774___    701 AGGACATCAGCTTCAGCAAACGCCTCGGCTATACAATGAAGCTGATCGGG    750
                     |.||||||||||||||||||||.|||||||||||.||||||||||||||.
RBAM_029370__    701 AAGACATCAGCTTCAGCAAACGGCTCGGCTATACGATGAAGCTGATCGGC    750

BSNT_04774___    751 ATTGCTCAGCGTGACGGCAGCAAAATCGAGGTCAGCGTACAGCCGACACT    800
                     ||.||.||||||||.|.||..||||||||.||||||||.|||||||||||
RBAM_029370__    751 ATCGCCCAGCGTGATGACAATAAAATCGAAGTCAGCGTTCAGCCGACACT    800

BSNT_04774___    801 GCTTCCTGACCATCATCCGCTTTCTGCTGTTCATAATGAGTTTAACGCTG    850
                     |||.||.||.|||||.|||||.|||||.||.|||||.||||||||.||.|
RBAM_029370__    801 GCTGCCGGATCATCACCCGCTCTCTGCGGTGCATAACGAGTTTAATGCCG    850

BSNT_04774___    851 TTTATGTATACGGCGAGGCTGTCGGTGAGACGATGTTCTACGGGCCGGGA    900
                     ||||.||.|||||.||.||.|||||.||.||||||||.|||||.||.|||
RBAM_029370__    851 TTTACGTGTACGGAGAAGCCGTCGGCGAAACGATGTTTTACGGCCCCGGA    900

BSNT_04774___    901 GCCGGAAGCATGCCGACAGCGACATCCGTTGTTTCTGACCTCGTCGCTGT    950
                     |||||||||||||||||.||||||||.||.|||||.||.||.|||||.||
RBAM_029370__    901 GCCGGAAGCATGCCGACTGCGACATCGGTCGTTTCCGATCTGGTCGCGGT    950

BSNT_04774___    951 CATGAAAAATATGCGCCTCGGTGTAACCGGCAACAGCTTTGTCGGGCCGC   1000
                     |||||||||.|||||.|||||.||||.|||.|||||||||||||..||||
RBAM_029370__    951 CATGAAAAACATGCGTCTCGGCGTAAACGGAAACAGCTTTGTCGCCCCGC   1000

BSNT_04774___   1001 AATATGAGAAAAATATGAAATCGCCGTCTGACATTTATGCACAGCAGTTT   1050
                     |.|.|||.|.||||.||||...|||||||||.||.|||||.|||||||||
RBAM_029370__   1001 AGTTTGAAAGAAATCTGAAGCAGCCGTCTGATATCTATGCCCAGCAGTTT   1050

BSNT_04774___   1051 TTAAGAATTCATGTAAAAGATGAGGTTGGTTCATTCTCGAAAATTACATC   1100
                     |||||||||||.||.|||||..||||.||.||.||.||.|||||.|||||
RBAM_029370__   1051 TTAAGAATTCACGTCAAAGACCAGGTCGGCTCTTTTTCAAAAATCACATC   1100

BSNT_04774___   1101 TGTGTTCTCAGAGCGGGGCGTGAGCTTTGAAAAAATCCTTCAGCTGCCAA   1150
                     .|..|||||||||||.|||||.||||||||||||||.||.||||||||.|
RBAM_029370__   1101 GGCCTTCTCAGAGCGCGGCGTCAGCTTTGAAAAAATTCTGCAGCTGCCGA   1150

BSNT_04774___   1151 TTAAAGGCCATGATGAGTTAGCTGAAATCGTAATTGTCACACATCATACA   1200
                     |.|||||||||||.||..|.||.||||||||.||.|||||.|||||||||
RBAM_029370__   1151 TCAAAGGCCATGACGACCTCGCGGAAATCGTCATCGTCACGCATCATACA   1200

BSNT_04774___   1201 TCAGAAGCTGATTTCAGTGATATCCTGCAAAACCTAAATGATTTGGAAGT   1250
                     ||.||||..|||||||||||.||.|||||||||.|||||||..|.|||||
RBAM_029370__   1201 TCGGAAGAAGATTTCAGTGACATTCTGCAAAACTTAAATGACCTCGAAGT   1250

BSNT_04774___   1251 CGTTCAAGAAGTCAAAAGCACATATCGTGTAGAAGGGAACGGTTGGAGCT   1300
                     |||.||||||||.||||||||||||||.||||||||||||||||||||||
RBAM_029370__   1251 CGTACAAGAAGTAAAAAGCACATATCGCGTAGAAGGGAACGGTTGGAGCT   1300

BSNT_04774___   1301 AA   1302
                     ||
RBAM_029370__   1301 AA   1302


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