Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04773 and RBAM_029360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:18
# Commandline: needle
# -asequence dna-align/BSNT_04773___thrC.1.9828.seq
# -bsequence dna-align/RBAM_029360___thrC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04773___thrC-RBAM_029360___thrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04773___thrC-RBAM_029360___thrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04773___thrC
# 2: RBAM_029360___thrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1068
# Identity: 853/1068 (79.9%)
# Similarity: 853/1068 (79.9%)
# Gaps: 9/1068 ( 0.8%)
# Score: 3441.0
#
#
#=======================================
BSNT_04773___ 1 TTGGAGCTAATGTGGAAAGGACTTATCCATCAATATAAAGAATTTTTACC 50
||||||||||||||.|||||||||||||||||||||.|.||
RBAM_029360__ 1 ---------ATGTGGAAAGGACTCATCCATCAATATAAAGAATTTCTGCC 41
BSNT_04773___ 51 TGTAACAGATCAAACACCGGCGCTAACTTTACATGAAGGAAACACACCTC 100
.||.||.|||||.||.|||||.||.||.||.||||||||.|||||.||.|
RBAM_029360__ 42 GGTGACGGATCAGACGCCGGCCCTGACATTGCATGAAGGCAACACGCCGC 91
BSNT_04773___ 101 TTATTCACCTGCCGAAGCTGTCTGAGCAGCTCGGAATTGAGCTTCATGTC 150
|.||||||||||||||.||.||.||..|||||||||||||.||.|||||.
RBAM_029360__ 92 TGATTCACCTGCCGAAACTTTCCGAAAAGCTCGGAATTGAACTGCATGTG 141
BSNT_04773___ 151 AAAACGGAAGGCGTCAATCCTACGGGATCATTTAAAGATCGCGGAATGGT 200
|||||.||.|||||.|||||.||||||||.||||||||.|||||.|||||
RBAM_029360__ 142 AAAACAGAGGGCGTTAATCCGACGGGATCCTTTAAAGACCGCGGCATGGT 191
BSNT_04773___ 201 TATGGCTGTGGCAAAGGCAAAAGAAGAAGGCAATGACACGATTATGTGCG 250
.|||||.||.||.||.||.|||||||||||||||||.||.||.|||||||
RBAM_029360__ 192 CATGGCGGTCGCCAAAGCGAAAGAAGAAGGCAATGATACCATCATGTGCG 241
BSNT_04773___ 251 CGTCAACAGGTAACACTTCCGCTGCTGCGGCAGCATATGCAGCCCGTGCT 300
|.||.|||||.|||||.|||||.||.||.||.|||||.||.||..|.||.
RBAM_029360__ 242 CCTCTACAGGGAACACATCCGCGGCAGCTGCGGCATACGCGGCGAGAGCC 291
BSNT_04773___ 301 AACATGAAATGCATTGTCATCATCCCGAACGGAAAAATTGCATTTGGAAA 350
..||||||||||||.||||||||||||.||||||||||.||.||.|||||
RBAM_029360__ 292 GGCATGAAATGCATCGTCATCATCCCGGACGGAAAAATCGCCTTCGGAAA 341
BSNT_04773___ 351 ACTCGCTCAAGCTGTCATGTACGGAGCCGAGATTATCGCAATTGACGGAA 400
|||.||.||.||.|||||||||||.||.||.||.|||||.||||||||||
RBAM_029360__ 342 ACTTGCGCAGGCCGTCATGTACGGTGCGGAAATCATCGCGATTGACGGAA 391
BSNT_04773___ 401 ACTTTGACGATGCGCTTAAAATTGTCCGTTCCATCTGTGAGAAATCACCG 450
||||||||||.|||||....||.|||||.||.||.||.||.|||||||||
RBAM_029360__ 392 ACTTTGACGACGCGCTGGCCATCGTCCGGTCGATTTGCGAAAAATCACCG 441
BSNT_04773___ 451 ATTGCCCTTGTCAACTCAGTCAACCCTTACCGCATTGAAGGCCAAAAAAC 500
|||||..|.||.||.|||||.|||||||||||.||||||||.||||||||
RBAM_029360__ 442 ATTGCATTAGTGAATTCAGTAAACCCTTACCGGATTGAAGGGCAAAAAAC 491
BSNT_04773___ 501 TGCTGCCTTCGAAGTGTGCGAACAGCTGGGGGAAGCGCCTGATGTTTTAG 550
.||.|||||.|||||.|||||||||||.||.||||||||.||..||.|.|
RBAM_029360__ 492 AGCGGCCTTTGAAGTATGCGAACAGCTCGGCGAAGCGCCGGACATTCTGG 541
BSNT_04773___ 551 CGATCTCGGTCGGAAATGCTGGAAACATCACTGCGTACTGGAAGGGCTTC 600
|||||.||||.|||||.||.||.||.|||||.||.||||||||.||.|||
RBAM_029360__ 542 CGATCCCGGTAGGAAACGCCGGGAATATCACGGCCTACTGGAAAGGGTTC 591
BSNT_04773___ 601 AAGGAATATCATGAGAAAAACGGCACAGGCCTTCCGAAAATGCGCGGCTT 650
||.|||||.|||||||||||||||||.||.||||||||.||||||||.||
RBAM_029360__ 592 AAAGAATACCATGAGAAAAACGGCACCGGACTTCCGAAGATGCGCGGTTT 641
BSNT_04773___ 651 TGAAGCTGAGGGTGCGGCGGCAATCGTGCGCAATGAAGTGATTGAAAATC 700
|||.||.||.|||.|.|||||.|||||.|||...|||||.|||.||||||
RBAM_029360__ 642 TGAGGCGGAAGGTTCTGCGGCTATCGTCCGCGGCGAAGTCATTAAAAATC 691
BSNT_04773___ 701 CGGAAACAATAGCGACAGCCATTCGTATCGGAAACCCGGCAAGCTGGGAC 750
|.||.||..|.|||||.||.||.||.|||||.||.||.||.|||||||||
RBAM_029360__ 692 CAGAGACCGTTGCGACGGCAATCCGAATCGGGAATCCTGCCAGCTGGGAC 741
BSNT_04773___ 751 AAAGCTGTAAAGGCAGCCGAGGAATCCAATGGGAAAATTGACGAAGTCAC 800
|||||.||....||.||.||.|||||....||.||||||||.||||||||
RBAM_029360__ 742 AAAGCGGTGCTCGCTGCGGAAGAATCAGCCGGAAAAATTGATGAAGTCAC 791
BSNT_04773___ 801 TGATGATGAAATCCTTCACGCATATCAGCTGATCGCCCGTGTAGAAGGCG 850
.|||||.||.||.||||||||.|||||||||||.|||||||.||||||||
RBAM_029360__ 792 AGATGAAGACATTCTTCACGCTTATCAGCTGATTGCCCGTGAAGAAGGCG 841
BSNT_04773___ 851 TGTTTGCAGAACCGGGTTCTTGCGCGTCTATCGCAGGAGTGCTGAAACAG 900
|||||||.||||||||.||.||.||.||.|||||.||.||..||||||||
RBAM_029360__ 842 TGTTTGCCGAACCGGGCTCCTGTGCATCCATCGCCGGCGTTTTGAAACAG 891
BSNT_04773___ 901 GTGAAATCCGGAGAAATTCCGAAAGGCAGCAAGGTCGTAGCTGTGTTAAC 950
||.||||||||.||||||||.|||||||||||.||.||.||.||.||.||
RBAM_029360__ 892 GTAAAATCCGGTGAAATTCCAAAAGGCAGCAAAGTTGTCGCAGTTTTGAC 941
BSNT_04773___ 951 AGGAAACGGACTGAAAGATCCGAACACAGCGGTCGACATTTCAGAAATCA 1000
.||||||||.|||||||||||||||||.||.||.|||.|.||.||.||.|
RBAM_029360__ 942 CGGAAACGGCCTGAAAGATCCGAACACGGCTGTAGACGTATCTGACATAA 991
BSNT_04773___ 1001 AGCCTGTCACATTGCCGACTGATGAAGACAGCATCCTTGAATATGTAAAA 1050
|.||..|.||..|||||||.|||||.|||||.||.||.|||||..||||.
RBAM_029360__ 992 AACCGATTACGCTGCCGACAGATGAGGACAGTATTCTGGAATACTTAAAT 1041
BSNT_04773___ 1051 GGAGCGGCCCGTGTATGA 1068
||||||||.|||||||||
RBAM_029360__ 1042 GGAGCGGCGCGTGTATGA 1059
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