Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04769 and RBAM_029330

See Amino acid alignment / Visit BSNT_04769 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_04769.1.9828.seq
#    -bsequence dna-align/RBAM_029330___yutI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04769-RBAM_029330___yutI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04769-RBAM_029330___yutI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04769
# 2: RBAM_029330___yutI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     212/261 (81.2%)
# Similarity:   212/261 (81.2%)
# Gaps:          24/261 ( 9.2%)
# Score: 960.0
# 
#
#=======================================

BSNT_04769         1 ------------------------ATGACTGAAGTTGAAATGAAAGAACA     26
                                             ||||||||.||||||||||||||.||
RBAM_029330__      1 ATGTATATGAAAGGAGCGAATCTCATGACTGAGGTTGAAATGAAAGAGCA     50

BSNT_04769        27 GGTGCAGGAAGTACTGGACAAACTTCGTCCGTTTTTACTTCGTGACGGCG     76
                     .||.|||||||||.||||.|||.|.|||||||||.|.|||||||||||||
RBAM_029330__     51 AGTACAGGAAGTATTGGATAAATTACGTCCGTTTCTGCTTCGTGACGGCG    100

BSNT_04769        77 GTGACTGTGAGCTTGTAGACGTAGATGAAGGTATCGTTAAGCTTCGTCTT    126
                     ||||||||||||||||.||.|||||.|||||.||.||.||||||||.||.
RBAM_029330__    101 GTGACTGTGAGCTTGTTGATGTAGACGAAGGCATTGTAAAGCTTCGCCTC    150

BSNT_04769       127 CTAGGCGCATGCGGCAGCTGCCCAAGTTCAACGATTACGCTGAAAGCCGG    176
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029330__    151 CTTGGCGCATGCGGCAGCTGCCCAAGTTCAACGATTACGCTGAAAGCCGG    200

BSNT_04769       177 AATTGAGCGCGCTCTTCTAGAAGAAGTGCCGGGTGTCGTTGAAGTAGAAC    226
                     |||.||.|||||.|||||.||||||||.||||||||||||||||||||||
RBAM_029330__    201 AATCGAACGCGCCCTTCTTGAAGAAGTACCGGGTGTCGTTGAAGTAGAAC    250

BSNT_04769       227 AAGTCTTTTAA    237
                     ||||.||||||
RBAM_029330__    251 AAGTATTTTAA    261


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