Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04764 and RBAM_029300

See Amino acid alignment / Visit BSNT_04764 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:18
# Commandline: needle
#    -asequence dna-align/BSNT_04764___yuzB.1.9828.seq
#    -bsequence dna-align/RBAM_029300___yuzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04764___yuzB-RBAM_029300___yuzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04764___yuzB-RBAM_029300___yuzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04764___yuzB
# 2: RBAM_029300___yuzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     194/237 (81.9%)
# Similarity:   194/237 (81.9%)
# Gaps:           0/237 ( 0.0%)
# Score: 798.0
# 
#
#=======================================

BSNT_04764___      1 ATGAATCCAATGATTGAATTTTGTGTCAGCAATCTGGCTCACGGCTCTCA     50
                     ||||||||.|||||||||||.|||||||||||..|.||.|.|||.||.||
RBAM_029300__      1 ATGAATCCGATGATTGAATTCTGTGTCAGCAACTTAGCGCGCGGTTCCCA     50

BSNT_04764___     51 GGAAGCCCGGGCGATTTTGGAGAAGGATCCCAACCTTGATGTCCTTGAAT    100
                     ||||||.|..|.|||.||.|||||||||||.|||.|.||.||.|||||||
RBAM_029300__     51 GGAAGCACTTGAGATCTTAGAGAAGGATCCGAACTTGGACGTGCTTGAAT    100

BSNT_04764___    101 ATGGCTGCTTAAGCTACTGCGGGACATGCATGGAATCGCTTTTCGCTCTG    150
                     |.|||||.||||||||.|||||||.|||||||||.||.||.|||||.|||
RBAM_029300__    101 ACGGCTGTTTAAGCTATTGCGGGAAATGCATGGAGTCCCTGTTCGCCCTG    150

BSNT_04764___    151 GTAAACGGAGAAGTCGTCATGGGTGAAACGCCTGCTGAGCTTGTTGAGAA    200
                     ||.|||||.|||||.||||.|||.|..|||||||||||.||.|||||.||
RBAM_029300__    151 GTCAACGGCGAAGTGGTCACGGGAGGCACGCCTGCTGAACTGGTTGACAA    200

BSNT_04764___    201 TATATATACCTTTATTGAAGAAAATCCAATGTTTTAA    237
                     .||||||||.||.||.|||||||||||.|||||||||
RBAM_029300__    201 CATATATACATTCATAGAAGAAAATCCGATGTTTTAA    237


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