Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04723 and RBAM_029150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_04723___yumB.1.9828.seq
# -bsequence dna-align/RBAM_029150___yumB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04723___yumB-RBAM_029150___yumB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04723___yumB-RBAM_029150___yumB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04723___yumB
# 2: RBAM_029150___yumB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1272
# Identity: 997/1272 (78.4%)
# Similarity: 997/1272 (78.4%)
# Gaps: 63/1272 ( 5.0%)
# Score: 4039.5
#
#
#=======================================
BSNT_04723___ 1 ATGGGTCTAACAAAAGCAAAAAAAGAGAAGGTGGATGTGATGGCATTGAA 50
|||||||||||
RBAM_029150__ 1 ---------------------------------------ATGGCATTGAA 11
BSNT_04723___ 51 TAAGCCCAAAATCGTGATTTTAGGTGCAGGATATGGCGGATTGATGACGG 100
|||.||||||||||||.|||||||||||||.|||||.|||||.|||||.|
RBAM_029150__ 12 TAAACCCAAAATCGTGGTTTTAGGTGCAGGTTATGGTGGATTAATGACAG 61
BSNT_04723___ 101 TGACAAGGCTGACGAAGTATGTCGGGCCGAATGATGCTGACATTACGCTT 150
|.||||||||..|||||.||.|||||.|.|||||.|||||||||||..|.
RBAM_029150__ 62 TAACAAGGCTTCCGAAGCATATCGGGGCAAATGACGCTGACATTACTTTG 111
BSNT_04723___ 151 GTAAATAAACACAATTATCATTATGAAACGACATGGATGCATGAAGCGAG 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_029150__ 112 GTCAATAAACACAATTATCATTATGAAACGACATGGATGCATGAAGCGAG 161
BSNT_04723___ 201 CGCGGGTACGCTCCATCATGACCGCTGCCGTTATCAGATAAAAGATGTAA 250
|||.||.|||||.|||||||||||||||.|.|||||.|||||||||||||
RBAM_029150__ 162 CGCAGGAACGCTGCATCATGACCGCTGCAGATATCAAATAAAAGATGTAA 211
BSNT_04723___ 251 TCAACCAGTCACGGGTGAATTTTGTACAGGATACCGTAAAGGCAAT---- 296
||||..|.||||||||.||.|||||.||||||||||||||.||.||
RBAM_029150__ 212 TCAATGAATCACGGGTCAAATTTGTGCAGGATACCGTAAAAGCGATAGAT 261
BSNT_04723___ 297 ---CAAAATTGATGATAAAAAAGTTG-TGCTTGCGAATGGGGAACTGCAG 342
|||||| ||||||.|| .||||.|..|.|||||..|.|..
RBAM_029150__ 262 GTGCAAAAT--------AAAAAGGTGACGCTTTCACAAGGGGACATCCCT 303
BSNT_04723___ 343 TACGATTATTTAGTCATCGGGCTCGGCGCCGTGCCTGAAACGTTCGGCAT 392
||.||||||.|.|||||||||||.||||||||.||||||||.||.||.||
RBAM_029150__ 304 TATGATTATCTTGTCATCGGGCTTGGCGCCGTCCCTGAAACATTTGGGAT 353
BSNT_04723___ 393 TAAAGGCTTAAAAGAATATGCGTTTCCGATTGCCAACATCAACACGTCGC 442
|||||||||||||||||..||.||||||||.||.||.||.||.|||||||
RBAM_029150__ 354 TAAAGGCTTAAAAGAATTCGCTTTTCCGATCGCGAATATTAATACGTCGC 403
BSNT_04723___ 443 GCCTGCTGCGGGAACATATTGAGCTGCAGTTTGCGACTTACAATACGGAA 492
|||.||||...||.|||||||||||.||.||||||||.|||||||||||.
RBAM_029150__ 404 GCCAGCTGAAAGACCATATTGAGCTCCAATTTGCGACATACAATACGGAG 453
BSNT_04723___ 493 GCGGAAAAACGGCCGGACAGGTTAACGATCGTTGTTGGCGGTGCCGGATT 542
||.||||||||.||.|||.|.|||||.||||||||.|||||.||.||.||
RBAM_029150__ 454 GCCGAAAAACGCCCTGACCGCTTAACCATCGTTGTCGGCGGAGCGGGCTT 503
BSNT_04723___ 543 TACGGGAATTGAATTTCTTGGCGAACTGGCTGCTCGCGTGCCGGAGCTCT 592
||||||||||||||||||.||.||.||.||....|||..|||||||.|.|
RBAM_029150__ 504 TACGGGAATTGAATTTCTCGGTGAGCTTGCGAACCGCAAGCCGGAGTTAT 553
BSNT_04723___ 593 GTAAGGAATATGACGTTGACAGAAGCCTTGTCCGCATCATTTGTGTGGAA 642
|.|...|.|||||..|.||...|||.||.|||||.|||.|.|||||.||.
RBAM_029150__ 554 GCAGATATTATGATATAGATGAAAGTCTCGTCCGGATCGTCTGTGTCGAG 603
BSNT_04723___ 643 GCAGCGCCGACCGTTTTGCCGGGCTTTGATCCGGAACTTGTTGATTACGC 692
||.||.|||||.|||||||||||.|||||||||||.|||||.||||||||
RBAM_029150__ 604 GCCGCCCCGACGGTTTTGCCGGGATTTGATCCGGAGCTTGTCGATTACGC 653
BSNT_04723___ 693 CGTACATTATCTTGAG-GAAAACGGAGTTGAGTTCAAGATCGGCACGGCT 741
|||.||.||.|||||| |.||| ||.|||||.||.||.||||||||.||.
RBAM_029150__ 654 CGTTCAATACCTTGAGAGCAAA-GGCGTTGAATTTAAAATCGGCACCGCG 702
BSNT_04723___ 742 GTACAAGAATGTACCCCG--GAAGGAGTCAGAGTCGGCAAAAAAGATGAG 789
||.|||||||| ||.|| ||.||.||||.|||||||||.||||||||.
RBAM_029150__ 703 GTTCAAGAATG--CCGCGCAGACGGTGTCACAGTCGGCAAGAAAGATGAA 750
BSNT_04723___ 790 GAACCAGAGCAGATCAAATCGCAAACCGTTGTTTGGGCGGCAGGTGTCCG 839
||.||.||..|.|||||||||||.||||||||.||||||||.||.||.||
RBAM_029150__ 751 GAGCCGGAAGAAATCAAATCGCAGACCGTTGTCTGGGCGGCGGGCGTGCG 800
BSNT_04723___ 840 CGGCCATCCGATTGTAGAGGAAGCCGGTTTTGAAAATATGCGCGGCCGGG 889
|||.||||||||.||.||||||||.|||||||||||||||||||||||.|
RBAM_029150__ 801 CGGGCATCCGATCGTGGAGGAAGCGGGTTTTGAAAATATGCGCGGCCGTG 850
BSNT_04723___ 890 TGAAAGTCAACCCTGATCTTCGCGCCCCAGGACATGACAATGTCTTTATT 939
|.||.|||||||||||||||||.||.||.||||||||..|.||.||||||
RBAM_029150__ 851 TCAAGGTCAACCCTGATCTTCGGGCGCCGGGACATGATGACGTTTTTATT 900
BSNT_04723___ 940 CTCGGCGACAGCTCGCTGTTTATGAATGAAGATACAGAGCGTCCGTATCC 989
|||||||||||||||||.|||||.||||||||.||.||.||.|||||.||
RBAM_029150__ 901 CTCGGCGACAGCTCGCTCTTTATCAATGAAGAGACGGAACGGCCGTACCC 950
BSNT_04723___ 990 GCCGACTGCGCAAATTGCAATGCAGCAGGGCATAACGGTCGCTAAAAACC 1039
|||||||||.||.||.||.||||||||.||...|||||||||.|||||.|
RBAM_029150__ 951 GCCGACTGCTCAGATCGCGATGCAGCAAGGAGAAACGGTCGCCAAAAATC 1000
BSNT_04723___ 1040 TTGGCAGGCTT-ATTAAGGGCGGAGAGCTTGAGGAATTCAAGCCGGACAT 1088
|.||| ||.|| |||||.||.||..|||||||.||.||||||||.|||||
RBAM_029150__ 1001 TGGGC-GGTTTGATTAAAGGAGGCCAGCTTGAAGAGTTCAAGCCTGACAT 1049
BSNT_04723___ 1089 TAAGGGAACAGTGGCTTCTCTTGGCGAGCATAACGCGGTTGGGGTTGTTT 1138
|||.|||||.||.||.||.||.||.|||||||||||.||.||.||.||.|
RBAM_029150__ 1050 TAAAGGAACCGTCGCCTCCCTCGGTGAGCATAACGCCGTCGGAGTCGTAT 1099
BSNT_04723___ 1139 ATGGCAGAAAGCTGAAAGGCACGCCCGCTTCGTTTATGAAAAAAGTCATT 1188
|.|||||.|||||.|||||||||||.||.||.|||||||||||.||||||
RBAM_029150__ 1100 ACGGCAGGAAGCTCAAAGGCACGCCGGCGTCCTTTATGAAAAAGGTCATT 1149
BSNT_04723___ 1189 GATAACCGCTCGCTGTTTATGATTGGCGGACTCGGACTGACACTGAAAAA 1238
||.|||||||||||.||||||||.|||||.||.||.|||||.||||||||
RBAM_029150__ 1150 GACAACCGCTCGCTCTTTATGATCGGCGGGCTGGGCCTGACGCTGAAAAA 1199
BSNT_04723___ 1239 AGGCAAGTTCAAGTTTTTCTAA 1260
|||.|||||.||.||.||||.|
RBAM_029150__ 1200 AGGGAAGTTTAAATTCTTCTGA 1221
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