Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04720 and RBAM_029140

See Amino acid alignment / Visit BSNT_04720 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:16
# Commandline: needle
#    -asequence dna-align/BSNT_04720___yuiA.1.9828.seq
#    -bsequence dna-align/RBAM_029140___yuiA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04720___yuiA-RBAM_029140___yuiA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04720___yuiA-RBAM_029140___yuiA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04720___yuiA
# 2: RBAM_029140___yuiA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 144
# Identity:      94/144 (65.3%)
# Similarity:    94/144 (65.3%)
# Gaps:          18/144 (12.5%)
# Score: 314.0
# 
#
#=======================================

BSNT_04720___      1 ATGAAAACTGCAACGACAACCGCTTCACATGCATGCCCATTTTGTTCAGG     50
                     ||||||||..||.|.|.||.|.|..|   .||.||.||.||.||.|||||
RBAM_029140__      1 ATGAAAACGACAGCAAAAAGCACGGC---GGCGTGTCCGTTCTGCTCAGG     47

BSNT_04720___     51 AAAAGGATATTTTCAATTGATTCTCGGCGGTTCAGAGACTTGTCCGTCTT    100
                     .|||||.||||||||||||.||||.|||||.||.||.||.|||||.||.|
RBAM_029140__     48 TAAAGGGTATTTTCAATTGCTTCTTGGCGGCTCCGAAACATGTCCCTCCT     97

BSNT_04720___    101 GCCAGGGGACAGGAAAAGACAGTCATTCTTTTTCCAGCCGTTGA    144
                     |||||||.|..||.|||||               .||.||.|||
RBAM_029140__     98 GCCAGGGAAGCGGCAAAGA---------------GAGACGCTGA    126


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