Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04694 and RBAM_028960

See Amino acid alignment / Visit BSNT_04694 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence dna-align/BSNT_04694.1.9828.seq
#    -bsequence dna-align/RBAM_028960___yukE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04694-RBAM_028960___yukE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04694-RBAM_028960___yukE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04694
# 2: RBAM_028960___yukE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     262/294 (89.1%)
# Similarity:   262/294 (89.1%)
# Gaps:           0/294 ( 0.0%)
# Score: 1182.0
# 
#
#=======================================

BSNT_04694         1 ATGGCAGGATTAATTCGTGTCACACCCGAAGAGCTAAGAGCGATGGCGAA     50
                     |||.|.|||||||||||||||||||||||||||||||||||||||||.||
RBAM_028960__      1 ATGTCTGGATTAATTCGTGTCACACCCGAAGAGCTAAGAGCGATGGCTAA     50

BSNT_04694        51 GCAATACGGCGTTGAAAGCCAAGAAGTATTAAATCAGGTTGATCGTTTAA    100
                     ||||||.|||||||||||.||.|||||..|.|||||||||||.||..|.|
RBAM_028960__     51 GCAATATGGCGTTGAAAGTCAGGAAGTCATGAATCAGGTTGACCGCCTGA    100

BSNT_04694       101 ACCGAATGATCTCTGATTTGAAAAGCATGTGGGAAGGTGCTTCAAGCGAA    150
                     ||||.|||||.||||||||||||.||||||||||||||||||||||.|||
RBAM_028960__    101 ACCGCATGATTTCTGATTTGAAAGGCATGTGGGAAGGTGCTTCAAGTGAA    150

BSNT_04694       151 GCGTTCGCAGATCAATACGAGCAGCTCAAACCTTCATTTATCAAAATGTC    200
                     ||.||.|||||||||||.||||||||.||||||||||||||.||||||||
RBAM_028960__    151 GCATTTGCAGATCAATATGAGCAGCTGAAACCTTCATTTATTAAAATGTC    200

BSNT_04694       201 AGATTTGCTTCAAGATGTGAATCAGCAGCTTGATCAAACAGCAAATACAC    250
                     .||.||||||||||||||||||||.|||||.||||||||.||||||||.|
RBAM_028960__    201 TGAATTGCTTCAAGATGTGAATCATCAGCTCGATCAAACGGCAAATACGC    250

BSNT_04694       251 TTGAGTCTACTGACCAAGACATCGCAAATCAAATCCGCGGATAA    294
                     |||||||||||||||||||.|||||.||.|||||.|||||||||
RBAM_028960__    251 TTGAGTCTACTGACCAAGATATCGCTAACCAAATTCGCGGATAA    294


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