Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04671 and RBAM_028830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence dna-align/BSNT_04671___yueK.1.9828.seq
# -bsequence dna-align/RBAM_028830___yueK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04671___yueK-RBAM_028830___yueK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04671___yueK-RBAM_028830___yueK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04671___yueK
# 2: RBAM_028830___yueK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1487
# Identity: 1192/1487 (80.2%)
# Similarity: 1192/1487 (80.2%)
# Gaps: 37/1487 ( 2.5%)
# Score: 4805.0
#
#
#=======================================
BSNT_04671___ 1 GTGTTAGAGTACGGATTTAAAGATGACAGCCTGTCATTACATACAGACCT 50
||| |||.|.||.||||||||.|||||..||||.|||||||||||.||
RBAM_028830__ 1 GTG---GAGCATGGTTTTAAAGACGACAGTTTGTCTTTACATACAGATCT 47
BSNT_04671___ 51 TTATCAGATCAATATGGCGGAAACGTACTGGAGAGACGGCATTCATGAAA 100
||||||.||.||||||||.|||||||||||||||||||||||||||||.|
RBAM_028830__ 48 TTATCAAATTAATATGGCCGAAACGTACTGGAGAGACGGCATTCATGAGA 97
BSNT_04671___ 101 AGAAAGCGATTTTTGAGCTGTTTTTCAGAAGGCTTCCGTTTGAAAATGGC 150
|.|||||||||||||||||.||||||||||.||||||.||||||||.|||
RBAM_028830__ 98 AAAAAGCGATTTTTGAGCTTTTTTTCAGAAAGCTTCCCTTTGAAAACGGC 147
BSNT_04671___ 151 TATGCCGTATTTGCGGGCTTGGAAAAAGCCATTGAATACTTGGAAAATTT 200
|||||.||||||||||||||.||||||||.||.|||||||||||.||.||
RBAM_028830__ 148 TATGCGGTATTTGCGGGCTTAGAAAAAGCAATCGAATACTTGGAGAACTT 197
BSNT_04671___ 201 CAAGTTTACGGATAGCGATTTGAGTTATTTACA---GGA--TGAACTCGG 245
|||.|||||.||.||||||.|||.|||||||.| ||| ||.||
RBAM_028830__ 198 CAAATTTACCGACAGCGATCTGAATTATTTAAAAACGGAATTGCAC---- 243
BSNT_04671___ 246 GTATCATGAAGATTTTATTGAATATTTGCGCGG--CTTATCTTTTACAGG 293
|||..|||.|||||.|||||.|||||.|| || ||| ||||||||.||
RBAM_028830__ 244 -TATGCTGATGATTTCATTGATTATTTACG-GGATCTT-TCTTTTACCGG 290
BSNT_04671___ 294 TTCACTTTACTCCATGAAAGAAGGAGAGCTCGTTTTTAACAATGAGCCGA 343
.||.||||||..||||||||||||.|||||||||||||||||.||.||||
RBAM_028830__ 291 ATCTCTTTACAGCATGAAAGAAGGCGAGCTCGTTTTTAACAACGAACCGA 340
BSNT_04671___ 344 TTATGAGGGTGGAGGCACCCCTGGTAGAAGCGCAGCTGATTGAAACAGCT 393
|||||.||||.||.||.||||||.|.|||||.|||||||||||.||.|||
RBAM_028830__ 341 TTATGCGGGTCGAAGCGCCCCTGATCGAAGCCCAGCTGATTGAGACGGCT 390
BSNT_04671___ 394 TTGCTCAACATTGTGAACTATCAAACATTAATTGCAACAAAGGCTGCCCG 443
.||||.|||||||||||.||.|||||||||||.||.||.||.||.|||||
RBAM_028830__ 391 CTGCTTAACATTGTGAATTACCAAACATTAATCGCCACGAAAGCGGCCCG 440
BSNT_04671___ 444 GATTAAAGGCGTCATTGGTGATGAAGTTGCGCTTGAATTCGGAACAAGAC 493
.|||||||||||..|.|||||.||||..||.||.|||||||||||..|.|
RBAM_028830__ 441 CATTAAAGGCGTTGTCGGTGACGAAGACGCCCTCGAATTCGGAACGCGGC 490
BSNT_04671___ 494 GGGCGCACGAAATGGATGCGGCCATGTGGGGAGCGAGAGCAGCCTTAATC 543
|.||.||.||||||||||||||.|||||||||||||||||.||.||.|||
RBAM_028830__ 491 GCGCCCATGAAATGGATGCGGCTATGTGGGGAGCGAGAGCGGCTTTGATC 540
BSNT_04671___ 544 GGCGGCTTTAGCGCGACAAGCAATGTAAGAGCCGGAAAGCGCTTTAATAT 593
||||||||.|||||.||.||.||||||||||||||||||||.||||||||
RBAM_028830__ 541 GGCGGCTTCAGCGCAACGAGTAATGTAAGAGCCGGAAAGCGTTTTAATAT 590
BSNT_04671___ 594 CCCGGTTTCCGGCACACATGCGCATGCGCTTGTGCAGGCTTACCGCGATG 643
.|||||.||||||||.||.||.||||||||.||.||.||.||||||||||
RBAM_028830__ 591 ACCGGTATCCGGCACGCACGCTCATGCGCTCGTACAAGCGTACCGCGATG 640
BSNT_04671___ 644 AATATACAGCTTTCAAAAAATACGCGGAAACACATAAGGATTGCGTCTTC 693
|||||||.||.||.||.|||||.|||||.||.|||||.||.|||||.||.
RBAM_028830__ 641 AATATACGGCATTTAAGAAATATGCGGAGACCCATAAAGACTGCGTGTTT 690
BSNT_04671___ 694 TTAGTTGACACGTATGACACGCTTCGTTCAGGCATGCCGAACGCGATTAG 743
.|.||.||.|||||.||.|||.|.|||||.||.||||||||.|||||||.
RBAM_028830__ 691 CTCGTAGATACGTACGATACGATCCGTTCGGGTATGCCGAATGCGATTAA 740
BSNT_04671___ 744 GGTTGCCAAGGAATTCGGCGACCGCATTAATTTCATTGGCATCCGTCTGG 793
.||.||.||||||||||||||.||.||.||.|||||.||||||||.||||
RBAM_028830__ 741 AGTCGCAAAGGAATTCGGCGATCGGATCAACTTCATCGGCATCCGCCTGG 790
BSNT_04671___ 794 ACAGCGGCGATTTGGCGTACCTGTCAAAAAAAGCCCGGAAAATGCTTGAT 843
|||||||.||.|||||||||||||||||||||||.||..|||||||||||
RBAM_028830__ 791 ACAGCGGGGACTTGGCGTACCTGTCAAAAAAAGCGCGTGAAATGCTTGAT 840
BSNT_04671___ 844 GAAGCAGGATTTACAGATGCGAAGGTGATTGCTTCAAGCGATTTGGATGA 893
|||||.||.||.|||||.||.|||||.|||||||||||||||.|.||.||
RBAM_028830__ 841 GAAGCGGGTTTCACAGACGCAAAGGTCATTGCTTCAAGCGATCTTGACGA 890
BSNT_04671___ 894 GCACACCATTATGAATTTAAAGGCTCAGGGAGCGCGCATTGATGTCTGGG 943
||||||.||..|.||..|.||..|.||.||||||...||.|||...||||
RBAM_028830__ 891 GCACACGATATTAAACCTGAAATCACAAGGAGCGAAAATCGATACGTGGG 940
BSNT_04671___ 944 GTGTCGGTACGAAGCTGATCACTGCCTATGACCAGCCGGCTCTCGGCGCA 993
|..||||.|||||||||||.||.||.||.||.|||||||||||||||||.
RBAM_028830__ 941 GCATCGGCACGAAGCTGATTACCGCATACGATCAGCCGGCTCTCGGCGCG 990
BSNT_04671___ 994 GTTTATAAACTCGTTGCCATTGAAGAAGACGGGAAAATGGTCGACACGAT 1043
|||||.||.||.||.|||||||||||.|||||.|||.||..||||||.||
RBAM_028830__ 991 GTTTACAAGCTTGTCGCCATTGAAGAGGACGGCAAATTGACCGACACCAT 1040
BSNT_04671___ 1044 CAAAATTTCGTCCAATCCTGAAAAAGTGACGACACCGGGCAGAAAGAAAG 1093
.||||||||.||.||.||||||||||||||.||.|||||.|||||||.||
RBAM_028830__ 1041 TAAAATTTCTTCAAACCCTGAAAAAGTGACAACGCCGGGAAGAAAGAGAG 1090
BSNT_04671___ 1094 TCTACCGCATTATTAATCAGTCCAACCATCATTCTGAAGGCGACTATATT 1143
|.|||||.|||||.||..||...||.||.||.||.|||||.||.|||||.
RBAM_028830__ 1091 TATACCGGATTATCAACAAGCTGAATCACCACTCGGAAGGTGATTATATC 1140
BSNT_04671___ 1144 GCGCTTTATGATGAGCGGGTGAATGATCAGAAGCGGCTCAGAATGTTCCA 1193
|||||||||||.||||||||.|||||||||||.||..|.|.|||||||||
RBAM_028830__ 1141 GCGCTTTATGACGAGCGGGTAAATGATCAGAAACGCTTAAAAATGTTCCA 1190
BSNT_04671___ 1194 CCCGGTTCATACATTCATCAGCAAATTTGTCACGAATTTTTATGCGAAGG 1243
.||.||.||.||.|||.||||||||||.|||||..||||.||||||||.|
RBAM_028830__ 1191 TCCCGTCCACACGTTCGTCAGCAAATTCGTCACTGATTTCTATGCGAAAG 1240
BSNT_04671___ 1244 ATCTTCATGAGCTGATTTTTGAGAAAGGTATTCTTTGCTACCAAAACCCT 1293
|.||.|||||||.|||||||||.||.||..||.|.|||||..|.||.||.
RBAM_028830__ 1241 ACCTGCATGAGCCGATTTTTGAAAACGGCGTTTTATGCTATGATAATCCC 1290
BSNT_04671___ 1294 GAGATTTCAGACATACAGCAGTATGTGCAGGATAACCTCAGCCTGCTTTG 1343
||.|||.|.|||||.|||||.||.||||||||||||||||..||.||.||
RBAM_028830__ 1291 GAAATTACCGACATCCAGCAATACGTGCAGGATAACCTCAAACTTCTGTG 1340
BSNT_04671___ 1344 GGAGGAATATAAGAGAATCAGCAAGCCGGAGGAATACCCGGTTGATTTAA 1393
|||||||||.||..|.||||||||||||||.|||||.|||||.|||||||
RBAM_028830__ 1341 GGAGGAATACAAACGGATCAGCAAGCCGGAAGAATATCCGGTCGATTTAA 1390
BSNT_04671___ 1394 GCGAGGACTGCTGGAGCAATAAAATGCAGCGGATCCACGAAGTGAAAAGC 1443
||||.||||||||||||||.||.|||||||||||.||.|||.|.||||||
RBAM_028830__ 1391 GCGAAGACTGCTGGAGCAACAAGATGCAGCGGATTCATGAAATCAAAAGC 1440
BSNT_04671___ 1444 AGAATTGAAGAAGAGCTTGA----GGAA---GAATAA 1473
|||| ||| |||| |||||.
RBAM_028830__ 1441 ------------GAGC-TGAAACGGGAACTTGAATAG 1464
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