Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04661 and RBAM_028760
See
Amino acid alignment /
Visit
BSNT_04661 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:08
# Commandline: needle
# -asequence dna-align/BSNT_04661___comA.1.9828.seq
# -bsequence dna-align/RBAM_028760___comA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04661___comA-RBAM_028760___comA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04661___comA-RBAM_028760___comA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04661___comA
# 2: RBAM_028760___comA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 648
# Identity: 516/648 (79.6%)
# Similarity: 516/648 (79.6%)
# Gaps: 6/648 ( 0.9%)
# Score: 2054.0
#
#
#=======================================
BSNT_04661___ 1 ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCAC 50
||||||||||||||||||||||||||.|||||||||||||||||.|||||
RBAM_028760__ 1 ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCAC 50
BSNT_04661___ 51 CAAGACAATTTTGGAAACGGATTCGAATTTGTCTGTTGATTGTCTCAGTC 100
||||||.|||.||||||||||..|||||.|.|||||.|||||.|||||||
RBAM_028760__ 51 CAAGACGATTCTGGAAACGGACACGAATCTTTCTGTCGATTGCCTCAGTC 100
BSNT_04661___ 101 CTGAACCGAGCGAACAGT---TTATCAAGCAGCATGATTTCTCGTCATAT 147
||||..|.||.|||||.| ||.|| |.|||||||||.||..|.||.
RBAM_028760__ 101 CTGATGCCAGTGAACAATTCGTTCTC---CGGCATGATTTTTCAGCTTAC 147
BSNT_04661___ 148 GATCTCATTTTAATGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGA 197
||||||||.|||||||||.|.|||||.||.|..||..|||..||.||.||
RBAM_028760__ 148 GATCTCATATTAATGGATTTAAATCTGGGTGATGACATCAGCGGCATAGA 197
BSNT_04661___ 198 GCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATTATCGTGT 247
||||||.||..|.||.|||.||||||||||||..||||||||.||.||.|
RBAM_028760__ 198 GCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGTAAAATCATTGTCT 247
BSNT_04661___ 248 ATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGT 297
|.||.||.||||||||.||.||||||||.||.|||.|.||.||.|||||.
RBAM_028760__ 248 ACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGC 297
BSNT_04661___ 298 CTGCACGGTGCCATCAGCAAAACGGAATCTAAAGAAAAGATCACCCAATA 347
|||||.||.||||||||||||||.|||||||||||.||.||||..|||||
RBAM_028760__ 298 CTGCATGGCGCCATCAGCAAAACCGAATCTAAAGAGAAAATCATGCAATA 347
BSNT_04661___ 348 CATATACCACGTACTCAATGGAGAAATTTTAGTCGATTTTGCTTACTTTA 397
||||||.|||||.|||||.|||.|.||||||||.|||||..|.||.||.|
RBAM_028760__ 348 CATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCA 397
BSNT_04661___ 398 AACAGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAA 447
|||||||||||||.||||||||||||||..||.||.|||||.||||||..
RBAM_028760__ 398 AACAGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGT 447
BSNT_04661___ 448 GAACAAGATGTGCTCACACCTAGAGAATGCCTGATTCTTCAAGAAGTTGA 497
||.||.|||..|.|.||.||.|||||..|||..|||||.|||||.||.||
RBAM_028760__ 448 GAGCAGGATCGGTTAACCCCGAGAGAGCGCCATATTCTCCAAGAGGTCGA 497
BSNT_04661___ 498 AAAAGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGC 547
||||||.||.||.||.||.||||||||||||||.|||||.||||||||||
RBAM_028760__ 498 AAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGC 547
BSNT_04661___ 548 GGTCCATTGAATACAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGT 597
||||.||||||||||||.||||.||.|||||.||.||||||||||||||.
RBAM_028760__ 548 GGTCGATTGAATACAGCCTGACGTCCATTTTTAACAAGCTGAATGTCGGC 597
BSNT_04661___ 598 TCACGGACGGAAGCGGTTTTGATAGCGAAATCAGACGGTGTACTTTAA 645
||.||.||.||||||||..||||.||.||.|||||....|||||.|||
RBAM_028760__ 598 TCCCGAACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTACTATAA 645
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.