Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04644 and RBAM_028640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04644___yufN.1.9828.seq
# -bsequence dna-align/RBAM_028640___yufN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04644___yufN-RBAM_028640___yufN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04644___yufN-RBAM_028640___yufN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04644___yufN
# 2: RBAM_028640___yufN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1150
# Identity: 849/1150 (73.8%)
# Similarity: 849/1150 (73.8%)
# Gaps: 101/1150 ( 8.8%)
# Score: 3257.5
#
#
#=======================================
BSNT_04644___ 1 ATGACTGGCCGGATCAGCTTTGAACCAAATTTTTCTGGGGGGTTATATCT 50
|
RBAM_028640__ 1 -------------------------------------------------T 1
BSNT_04644___ 51 TG----AACGAAAAATCGGATTGGCGATGTCACTTGTGATCGCAGCAGGC 96
|| ||||.|||||||||.||||||||.|.| |.|||||.|| |||
RBAM_028640__ 2 TGAAAAAACGCAAAATCGGAATGGCGATGGCGC---TCATCGCGGC-GGC 47
BSNT_04644___ 97 ----ACCATATTAGGAGCATGCGGAAACAGCGAAAAAAGC-AGCGGCTCA 141
|||||||||.|.||||||||....||.| |.||||| |.||||||.
RBAM_028640__ 48 CGGAACCATATTAAGCGCATGCGGTTCAAGTG-ACAAAGCAAACGGCTCC 96
BSNT_04644___ 142 GGCGAAGGCAAAAACAAATTCAGTGT-GGCGATGGTTACTGACGTAGGCG 190
||| .|.|||||| ||.|..|| ||| |||||.||.||..|.||||
RBAM_028640__ 97 GGC---AGTAAAAAC---TTTACCGTCGGC-ATGGTAACGGATATCGGCG 139
BSNT_04644___ 191 GAGTGGATGACAAATCCTTCAACCAATCAGCCTGGGAAGGCATCCAAGCC 240
|.||.|||||||||||.||.|||||.||.|||||||||||.||.||.||.
RBAM_028640__ 140 GCGTCGATGACAAATCATTTAACCAGTCCGCCTGGGAAGGTATTCAGGCA 189
BSNT_04644___ 241 TTTGGGAAAGAGAATGGGCTGAAAAAAGGCAAAAACGGTTACGACTATCT 290
||.||.|||||.||.|||||.|.|||||||||||.|||||..||||||||
RBAM_028640__ 190 TTCGGAAAAGACAACGGGCTTACAAAAGGCAAAAGCGGTTTTGACTATCT 239
BSNT_04644___ 291 TCAATCCAAATCTGATGCAGACTATACAACGAACTTAAATAAATTGGCGC 340
||||||.|||||.||||||||.|||||||||||||||||||||||.||||
RBAM_028640__ 240 TCAATCAAAATCAGATGCAGATTATACAACGAACTTAAATAAATTAGCGC 289
BSNT_04644___ 341 GTGAGAATTTTGACTTAATTTACGGCGTCGGCTACTTAATGGAGGATTCA 390
|.||..|.||||||.|.||||||||||||||.||..|.|||.|||||||.
RBAM_028640__ 290 GGGAACACTTTGACCTGATTTACGGCGTCGGGTATCTGATGCAGGATTCC 339
BSNT_04644___ 391 ATCAGCGAAATTGCTGACCAGCGTAAAAATACAAACTTTGCGATTATAGA 440
|||||||||||.||.||.|||||.|||.|.||.||.||||||||.||.||
RBAM_028640__ 340 ATCAGCGAAATCGCCGATCAGCGCAAAGACACCAATTTTGCGATCATTGA 389
BSNT_04644___ 441 TGCTGTTGTCGATAAAGACAACGTCGCAAGTATTACGTTTAAAGAGCAGG 490
.||.||||||.|.|||||||||||.||.||..||||.|||||||||||||
RBAM_028640__ 390 CGCCGTTGTCAAAAAAGACAACGTGGCGAGCCTTACATTTAAAGAGCAGG 439
BSNT_04644___ 491 AAGGCTCATTTCTCGTCGGAGTGGCCGCAGCCCTATCAAGCAAATCAGGA 540
||||.|||||.|||||.||||.||||||.||.|||||.||||||.|.|||
RBAM_028640__ 440 AAGGTTCATTCCTCGTGGGAGCGGCCGCTGCGCTATCGAGCAAAACGGGA 489
BSNT_04644___ 541 AAAATCGGCTTTGTAGGCGGCATGGAATCAGAGTTAATCAAAAAATTCGA 590
|||.||||.||.||.|||||.|||||.||.||.||.||||||||||||||
RBAM_028640__ 490 AAAGTCGGATTCGTGGGCGGAATGGAGTCTGAATTGATCAAAAAATTCGA 539
BSNT_04644___ 591 GGTCGGCTTCCGTGCCGGCGTGCAAGC----AATTAACCCTAAAGCCGTT 636
..||||||||||.||.||.||.||||| ||| ||.|||||....
RBAM_028640__ 540 AATCGGCTTCCGCGCGGGTGTACAAGCCGCAAAT----CCGAAAGCGACC 585
BSNT_04644___ 637 GTAGAAGTGAAATACGCAGGGGGTTTCGATAAAGCCGATGTCGGTAAAGC 686
||.|||||||||||.||.||.||.||.||.|||||||||||||||||.||
RBAM_028640__ 586 GTCGAAGTGAAATATGCGGGCGGATTTGACAAAGCCGATGTCGGTAAGGC 635
BSNT_04644___ 687 AACCGCCGAAAGCATGTATAAATCAGGCGTAGATGTTATTTATCACTCTG 736
.||.||.|||||||||||.|||||||||||.||.||.|||||||||.|.|
RBAM_028640__ 636 GACGGCTGAAAGCATGTACAAATCAGGCGTTGACGTCATTTATCACGCGG 685
BSNT_04644___ 737 CGGGCGCCACTGGCACAGGCGTCTTTACTGAAGCGAAAAACCTGAAAAAA 786
|.|||||.||.||.||.||||||||.||.|||||||||||.|||||||||
RBAM_028640__ 686 CCGGCGCAACGGGAACGGGCGTCTTCACAGAAGCGAAAAATCTGAAAAAA 735
BSNT_04644___ 787 GAAGATCCAAAACGCGATGTCTGGGTCATCGGTGTCGATAAAGACCAATA 836
||||||||.||.||..|.||.|||||||||||.||.|||||||||||.||
RBAM_028640__ 736 GAAGATCCGAAGCGGAACGTATGGGTCATCGGAGTTGATAAAGACCAGTA 785
BSNT_04644___ 837 CGCAGAAGGCCAGGTAGAAGGAACAGATGATAACGTCACCCTCACTTCCA 886
|||.|||||.||.||..||||.|||.|.||.||.|||||.|||||.||.|
RBAM_028640__ 786 CGCGGAAGGTCAAGTCAAAGGCACAAAAGACAATGTCACTCTCACATCAA 835
BSNT_04644___ 887 TGGTGAAAAAAGTAGATACAGTCGTTGAAGATGTAACGAAAAAAGCGAGT 936
||||.||||||||.|||||||.|||.||.||..|||||||||||||||||
RBAM_028640__ 836 TGGTCAAAAAAGTGGATACAGCCGTAGAGGACTTAACGAAAAAAGCGAGT 885
BSNT_04644___ 937 GACGGAAAGTTCCCGGGCGGCGAAACACTTACCTACGGGCTTGATCAAGA 986
|||||.||.||||||||||||.|||||.|.||.|||||..|.|..|||||
RBAM_028640__ 886 GACGGCAAATTCCCGGGCGGCAAAACATTAACATACGGTTTGGCGCAAGA 935
BSNT_04644___ 987 CGGAGTCGGCATTTCTCCATCT----AAACAA----AATCTATCGGATGA 1028
.|.|||||| ||||| |.|||| ||.||.||.||.||
RBAM_028640__ 936 TGCAGTCGG--------CATCTCGGAACACAAGGAGAACCTTTCTGACGA 977
BSNT_04644___ 1029 TGTGATCAAAG---CGGTCGATAAATGGAAGAAAAAAATCATCGACGGAT 1075
.||.||||||| |.|.|||| ||||||||.||||||...||||||.
RBAM_028640__ 978 CGTCATCAAAGCAACAGACGAT---TGGAAGAAGAAAATCGCGGACGGAC 1024
BSNT_04644___ 1076 TGGAAATCCCGGCAACTGAGAAAGAGCTGAAAACCTTCAAAGCTGAATAA 1125
|.||.|||||..|||||||.|||||..|||||.|||||||.|||||.|||
RBAM_028640__ 1025 TCGAGATCCCTTCAACTGAAAAAGAATTGAAATCCTTCAAGGCTGAGTAA 1074
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