Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04640 and RBAM_028600
See
Amino acid alignment /
Visit
BSNT_04640 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:06
# Commandline: needle
# -asequence dna-align/BSNT_04640___yuxK.1.9828.seq
# -bsequence dna-align/RBAM_028600___yuxK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04640___yuxK-RBAM_028600___yuxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04640___yuxK-RBAM_028600___yuxK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04640___yuxK
# 2: RBAM_028600___yuxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity: 293/436 (67.2%)
# Similarity: 293/436 (67.2%)
# Gaps: 44/436 (10.1%)
# Score: 895.0
#
#
#=======================================
BSNT_04640___ 1 GTGACTTCAGAACAAATTCCAAATCGCGT--TTTGCTGTTTGACGGTGTC 48
.|||...|||..||..||||..|.||||| ||| ||||||||||.|||
RBAM_028600__ 1 TTGAAACCAGCTCAGCTTCCGGACCGCGTGCTTT--TGTTTGACGGCGTC 48
BSNT_04640___ 49 TGCAATCTATGCAATGGCGCCGTGCAATTTATCATTAAACGTGATCCGGA 98
|||||..||||||..||||||||.|||||.|||||||||||.|||||||.
RBAM_028600__ 49 TGCAACTTATGCAGCGGCGCCGTTCAATTCATCATTAAACGCGATCCGGC 98
BSNT_04640___ 99 CGG----AT-TGATTT-CTTTCACATCGCTGCAGTCGGAAACAG---GGC 139
||| || |.|||| ||| ||| ||||.||.||.||.| ||
RBAM_028600__ 99 CGGCAAAATCTCATTTGCTT---CAT---TGCAATCAGATACCGCCCGG- 141
BSNT_04640___ 140 AGAGCCT---GC-TGAAAAAAAGCGGGCTCCCGACTGATCGGTTTGACAG 185
||||.| || |.|.|| ||.||.|||||.||.|..||||||||
RBAM_028600__ 142 -GAGCTTTTGGCATCAGAA-----GGACTTCCGACAGAACAATTTGACAG 185
BSNT_04640___ 186 CTTTGTCTTTATTGAAGACGGCCAAGTGCACACAAAGTCAACTGCAGCC- 234
|.|..|.|||||.|||.||||.|...|..|||.||| |.|.||||||
RBAM_028600__ 186 CATGATTTTTATCGAAAACGGGCGGATATACAAAAA---ATCCGCAGCCG 232
BSNT_04640___ 235 --ATTAAGGTTTTCAGGCATCTGCGAGGCCCATGGCGGCTCTTCGTC--- 279
.|.|||||||.|.|.|||||.||.||..|.|||||||| |||
RBAM_028600__ 233 TGTTAAAGGTTTCCCGTCATCTCCGCGGAGCCTGGCGGCT----GTCAGC 278
BSNT_04640___ 280 -CTGTTTTTCGCAGTACCGAAGCCTGTCAGAGATATGGTCTATTCTTTCA 328
.|.|||||||||||.||....||..||||.||.|..|.|||||||||||
RBAM_028600__ 279 GATTTTTTTCGCAGTGCCCCGCCCCCTCAGGGACAGAGCCTATTCTTTCA 328
BSNT_04640___ 329 TTGCCAAAAACCGCTATAAGTGGTTTGGCAAAAAAAATGAATGTATGCTC 378
|.|||.....|||.||.||.|||||.||.||||...|.|.|||.||||||
RBAM_028600__ 329 TCGCCCGGCGCCGTTACAAATGGTTCGGAAAAAGGGAAGCATGCATGCTC 378
BSNT_04640___ 379 CCCTCCCCTTCTATTAAAAAAAGATTTTTACCGTAA 414
|||||||||...||.|||||.||||||.|..|.|||
RBAM_028600__ 379 CCCTCCCCTGAGATCAAAAACAGATTTCTGTCTTAA 414
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.