Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04640 and RBAM_028600

See Amino acid alignment / Visit BSNT_04640 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:06
# Commandline: needle
#    -asequence dna-align/BSNT_04640___yuxK.1.9828.seq
#    -bsequence dna-align/RBAM_028600___yuxK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04640___yuxK-RBAM_028600___yuxK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04640___yuxK-RBAM_028600___yuxK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04640___yuxK
# 2: RBAM_028600___yuxK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     293/436 (67.2%)
# Similarity:   293/436 (67.2%)
# Gaps:          44/436 (10.1%)
# Score: 895.0
# 
#
#=======================================

BSNT_04640___      1 GTGACTTCAGAACAAATTCCAAATCGCGT--TTTGCTGTTTGACGGTGTC     48
                     .|||...|||..||..||||..|.|||||  |||  ||||||||||.|||
RBAM_028600__      1 TTGAAACCAGCTCAGCTTCCGGACCGCGTGCTTT--TGTTTGACGGCGTC     48

BSNT_04640___     49 TGCAATCTATGCAATGGCGCCGTGCAATTTATCATTAAACGTGATCCGGA     98
                     |||||..||||||..||||||||.|||||.|||||||||||.|||||||.
RBAM_028600__     49 TGCAACTTATGCAGCGGCGCCGTTCAATTCATCATTAAACGCGATCCGGC     98

BSNT_04640___     99 CGG----AT-TGATTT-CTTTCACATCGCTGCAGTCGGAAACAG---GGC    139
                     |||    || |.|||| |||   |||   ||||.||.||.||.|   || 
RBAM_028600__     99 CGGCAAAATCTCATTTGCTT---CAT---TGCAATCAGATACCGCCCGG-    141

BSNT_04640___    140 AGAGCCT---GC-TGAAAAAAAGCGGGCTCCCGACTGATCGGTTTGACAG    185
                      ||||.|   || |.|.||     ||.||.|||||.||.|..||||||||
RBAM_028600__    142 -GAGCTTTTGGCATCAGAA-----GGACTTCCGACAGAACAATTTGACAG    185

BSNT_04640___    186 CTTTGTCTTTATTGAAGACGGCCAAGTGCACACAAAGTCAACTGCAGCC-    234
                     |.|..|.|||||.|||.||||.|...|..|||.|||   |.|.|||||| 
RBAM_028600__    186 CATGATTTTTATCGAAAACGGGCGGATATACAAAAA---ATCCGCAGCCG    232

BSNT_04640___    235 --ATTAAGGTTTTCAGGCATCTGCGAGGCCCATGGCGGCTCTTCGTC---    279
                       .|.|||||||.|.|.|||||.||.||..|.||||||||    |||   
RBAM_028600__    233 TGTTAAAGGTTTCCCGTCATCTCCGCGGAGCCTGGCGGCT----GTCAGC    278

BSNT_04640___    280 -CTGTTTTTCGCAGTACCGAAGCCTGTCAGAGATATGGTCTATTCTTTCA    328
                      .|.|||||||||||.||....||..||||.||.|..|.|||||||||||
RBAM_028600__    279 GATTTTTTTCGCAGTGCCCCGCCCCCTCAGGGACAGAGCCTATTCTTTCA    328

BSNT_04640___    329 TTGCCAAAAACCGCTATAAGTGGTTTGGCAAAAAAAATGAATGTATGCTC    378
                     |.|||.....|||.||.||.|||||.||.||||...|.|.|||.||||||
RBAM_028600__    329 TCGCCCGGCGCCGTTACAAATGGTTCGGAAAAAGGGAAGCATGCATGCTC    378

BSNT_04640___    379 CCCTCCCCTTCTATTAAAAAAAGATTTTTACCGTAA    414
                     |||||||||...||.|||||.||||||.|..|.|||
RBAM_028600__    379 CCCTCCCCTGAGATCAAAAACAGATTTCTGTCTTAA    414


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