Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04636 and RBAM_028570
See
Amino acid alignment /
Visit
BSNT_04636 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:05
# Commandline: needle
# -asequence dna-align/BSNT_04636___kapD.1.9828.seq
# -bsequence dna-align/RBAM_028570___kapD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04636___kapD-RBAM_028570___kapD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04636___kapD-RBAM_028570___kapD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04636___kapD
# 2: RBAM_028570___kapD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 620
# Identity: 479/620 (77.3%)
# Similarity: 479/620 (77.3%)
# Gaps: 4/620 ( 0.6%)
# Score: 1826.0
#
#
#=======================================
BSNT_04636___ 1 GTGACGACAA--ACAGCTTACTCATTATTGATTTCGAATTTACAATGCCC 48
||| ||..| .|||..|.||||||||||||||.||||||||.|||||.
RBAM_028570__ 1 GTG--GATCAGCGCAGTCTGCTCATTATTGATTTTGAATTTACGATGCCT 48
BSNT_04636___ 49 GATGGAAAGTACAGCCCTCAAAACTTCTTCCCGGAAATCATTGAAGCCGG 98
||.|||||.||||||||.|||||.|||||.||.||.||.||||||||.||
RBAM_028570__ 49 GACGGAAAATACAGCCCGCAAAATTTCTTTCCCGAGATTATTGAAGCGGG 98
BSNT_04636___ 99 AATTGTAAAGTCGATTGATGATGAAGTGGTTGAGACGTTTTCTAGCTATG 148
.|||||.|||.||.|..|||||||||||..|||.||||||||.||.|||.
RBAM_028570__ 99 GATTGTCAAGACGGTGAATGATGAAGTGACTGAAACGTTTTCGAGTTATA 148
BSNT_04636___ 149 TTAGACCGAAAAAGTTCCCGAAGCTTACGAAACGCTGCAAATCATTTTTA 198
|.|.|||||||||.||.||||||||.||||||||.||||||.|.|||.|.
RBAM_028570__ 149 TCAAACCGAAAAAATTTCCGAAGCTGACGAAACGATGCAAAACCTTTCTG 198
BSNT_04636___ 199 AAAATAACCCAAAAACAGGTAGACGAAGGAATGAGATTCGAGGATTTCAT 248
||.||.|||||||||.|.||.||||..|||||.|..||..|.||.|||||
RBAM_028570__ 199 AATATCACCCAAAAAGACGTGGACGGCGGAATCACGTTTAATGAATTCAT 248
BSNT_04636___ 249 CCGTAAACTAAACGAGCTGGATCCTGAGAAAAACAGCACAATTATTACGT 298
|||.|||.||||.|||||.||||||||.||||||.|.||.||..|.||.|
RBAM_028570__ 249 CCGCAAATTAAATGAGCTTGATCCTGATAAAAACTGTACGATCGTCACCT 298
BSNT_04636___ 299 GGGGAAACATGGATATGAAAGTGCTGAAGCAAAACTGTATGTTTAACCAT 348
||||.||.|||||||||||||||.|.||||||||.||.|||||||||||.
RBAM_028570__ 299 GGGGCAATATGGATATGAAAGTGTTAAAGCAAAATTGCATGTTTAACCAC 348
BSNT_04636___ 349 ATCCCTTTCCCGTTTAAGGGAGAAATGAGAGATTTATCGCTTGAATACAA 398
||||||||.|||||.||.||||||.|..|.|||.|.||.|||||||||||
RBAM_028570__ 349 ATCCCTTTTCCGTTCAAAGGAGAACTTCGGGATCTGTCCCTTGAATACAA 398
BSNT_04636___ 399 AAACTTTTTTGGAGACCGGACATTGACGGGTTTATGGAAAGCTGCCGAAG 448
||||||.||.||.|||.|.||||||||.||..|.||||||||.||.||||
RBAM_028570__ 399 AAACTTCTTCGGCGACAGAACATTGACCGGCCTTTGGAAAGCGGCAGAAG 448
BSNT_04636___ 449 AGTATGGAGATTCCGGAACCGGCACCCATCATAAAGCGCTTGATGATGCT 498
|||||||.|||...||.||.|||||.||||||||||||||.||||||||.
RBAM_028570__ 449 AGTATGGCGATAAAGGGACGGGCACGCATCATAAAGCGCTGGATGATGCG 498
BSNT_04636___ 499 CTCACAGCATATAAACTTTTTAAGCTTGTTGAGCAGGATAAGCAGTATCT 548
|..||..||||.|||.|.||.||||||||.||||.||||||.||.|||||
RBAM_028570__ 499 CGGACGACATACAAATTATTCAAGCTTGTCGAGCGGGATAAACAATATCT 548
BSNT_04636___ 549 CGAAAAGCCAAAACCGCCCACAATCGGCGAAAGAATCGATTTAACCGAAC 598
.|||||.||.|||||.||.||.|||||.||..|..|||||.|.||.||||
RBAM_028570__ 549 TGAAAAACCGAAACCTCCGACGATCGGTGATCGCGTCGATCTGACTGAAC 598
BSNT_04636___ 599 TGTTCAAGCGCGCGACGTGA 618
||||....||.||.||.|.|
RBAM_028570__ 599 TGTTTCGCCGGGCCACATAA 618
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.