Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04623 and RBAM_028480

See Amino acid alignment / Visit BSNT_04623 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence dna-align/BSNT_04623___yuzA.1.9828.seq
#    -bsequence dna-align/RBAM_028480___yuzA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04623___yuzA-RBAM_028480___yuzA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04623___yuzA-RBAM_028480___yuzA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04623___yuzA
# 2: RBAM_028480___yuzA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity:     196/237 (82.7%)
# Similarity:   196/237 (82.7%)
# Gaps:           0/237 ( 0.0%)
# Score: 816.0
# 
#
#=======================================

BSNT_04623___      1 ATGAGTACCATTCAAAGAATTTGTCTTGTATTAACCATCATTGGCGCCAT     50
                     ||||||...|||||..|.||.|||||.||||||||.||.||.|||||.||
RBAM_028480__      1 ATGAGTGTTATTCAGCGTATCTGTCTCGTATTAACGATTATCGGCGCTAT     50

BSNT_04623___     51 TAACTGGGGACTGATCGGATTTTTCCAATTTGACTTAGTAGCGGCTATCT    100
                     ||||||||||||||||||.||||||||||||||.||||||||.||.||||
RBAM_028480__     51 TAACTGGGGACTGATCGGGTTTTTCCAATTTGATTTAGTAGCAGCCATCT    100

BSNT_04623___    101 TCGGCGGCCAAGGGTCAGCTCTTTCCCGAATCATTTACGGACTTGTCGGA    150
                     |||||||||||||.||||||||.||.||.||.||||||||.||||||||.
RBAM_028480__    101 TCGGCGGCCAAGGATCAGCTCTGTCGCGGATTATTTACGGCCTTGTCGGC    150

BSNT_04623___    151 ATCGCCGGCTTAATCAACCTCGGTCTGCTATTTAAGCCAAACGAGGAAAG    200
                     ||||||||..|.|||||.|||||.|||||.||||||||.|||||.||||.
RBAM_028480__    151 ATCGCCGGTCTGATCAATCTCGGCCTGCTGTTTAAGCCGAACGAAGAAAC    200

BSNT_04623___    201 ATCACGTGAAGAAGCAGCAAATCCTGAAATGCGATAG    237
                     |||.||.||.|||||.||||||||.|||.|..||||.
RBAM_028480__    201 ATCCCGCGAGGAAGCGGCAAATCCGGAAGTCAGATAA    237


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