Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04619 and RBAM_028430
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04619___pgi.1.9828.seq
# -bsequence dna-align/RBAM_028430___pgi.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04619___pgi-RBAM_028430___pgi.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04619___pgi-RBAM_028430___pgi.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04619___pgi
# 2: RBAM_028430___pgi
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity: 1133/1356 (83.6%)
# Similarity: 1133/1356 (83.6%)
# Gaps: 6/1356 ( 0.4%)
# Score: 4737.0
#
#
#=======================================
BSNT_04619___ 1 ATGACGCATGTACGCTTTGACTACTCAAAAGCGTTGACTTTCTTCAACGA 50
||||||||||||||||||||.|||||||.||||||..||||.|||||.||
RBAM_028430__ 1 ATGACGCATGTACGCTTTGATTACTCAAGAGCGTTACCTTTTTTCAATGA 50
BSNT_04619___ 51 ACATGAACTTACATATCTGCGGGACTTTGTAAAAACAGCACACCATAATA 100
|||||||||||||||....||.||.||.||||||||.||||||||.||||
RBAM_028430__ 51 ACATGAACTTACATACGCACGTGATTTCGTAAAAACGGCACACCACAATA 100
BSNT_04619___ 101 TCCATGAAAAAACAGGCGCGGGCAGCGATTTTCTAGGCTGGGTGGACCTC 150
|||||||||||||||||||.||.|||||.|||.||||.||||||||||||
RBAM_028430__ 101 TCCATGAAAAAACAGGCGCCGGAAGCGACTTTTTAGGATGGGTGGACCTC 150
BSNT_04619___ 151 CCTGAACATTATGATAAAGAAGAATTCGCGCGCATCAAAAAAAGCGCGGA 200
||||||.|.||.|||||||||||||||||||||||.|||||||||||.||
RBAM_028430__ 151 CCTGAAAACTACGATAAAGAAGAATTCGCGCGCATTAAAAAAAGCGCTGA 200
BSNT_04619___ 201 AAAAATCAAATCTGACTCTGATGT-CTTGCTTGTTGTCGGCATTGGCGGT 249
||||||||||||.||.||.||.|| ||| ||.||.||.||.||.||||||
RBAM_028430__ 201 AAAAATCAAATCAGATTCAGACGTGCTT-CTCGTCGTGGGTATCGGCGGT 249
BSNT_04619___ 250 TCTTATCTAGGAGCGCGGGCAGCGATTGAAGCGCTGAATCACGCGTTTTA 299
||.||..||||.||.||.||.||||||||||||||.|||||..|.||.||
RBAM_028430__ 250 TCATACTTAGGCGCCCGCGCGGCGATTGAAGCGCTCAATCATTCTTTCTA 299
BSNT_04619___ 300 TAACACTTTGCCAAAAGCAAAACGCGGCAATCCGCAAGTCATTTTTATCG 349
||||..|.||||.||||..||.|||...||.||.|||||.||.|||||||
RBAM_028430__ 300 TAACGTTCTGCCGAAAGACAAGCGCAAAAACCCTCAAGTTATCTTTATCG 349
BSNT_04619___ 350 GAAACAACATCAGTTCATCTTATATGAGAGACGTCATGGATCTTCTTGAA 399
|.|||||.|||||.|||.|||||||||.|||.||.|||||||||.|.|||
RBAM_028430__ 350 GCAACAATATCAGCTCAACTTATATGAAAGATGTTATGGATCTTTTGGAA 399
BSNT_04619___ 400 GATGTTGACTTCTCTATTAATGTGATTTCTAAATCAGGTACGACAACTGA 449
||.|.|||.||||||||.|||||.||||||||||||||.|||||.||.||
RBAM_028430__ 400 GACGCTGATTTCTCTATCAATGTCATTTCTAAATCAGGCACGACGACGGA 449
BSNT_04619___ 450 ACCTGCAATCGCTTTCCGTATTTTCCGCAAGCTTCTTGAAGAGAAATACG 499
||||||||||||||||||.|||||||||||.|||||||||||.|||||||
RBAM_028430__ 450 ACCTGCAATCGCTTTCCGGATTTTCCGCAAACTTCTTGAAGAAAAATACG 499
BSNT_04619___ 500 GTAAAGAAGAAGCGAAAGCGCGGATTTATGCAACAACTGATAAAGAGCGC 549
|.||||||||||||||||||||||||||.||.||.||.||||||||||||
RBAM_028430__ 500 GAAAAGAAGAAGCGAAAGCGCGGATTTACGCGACGACAGATAAAGAGCGC 549
BSNT_04619___ 550 GGCGCATTAAAAACGCTTTCTAACGAAGAAGGCTTCGAATCATTCGTTAT 599
|||||.|||||||||||||||||.||||||||||||||||||||||||||
RBAM_028430__ 550 GGCGCTTTAAAAACGCTTTCTAATGAAGAAGGCTTCGAATCATTCGTTAT 599
BSNT_04619___ 600 TCCTGACGATGTCGGCGGCCGTTATTCAGTTTTAACAGCTGTAGGTCTCT 649
||||||.|||||||||||.||||..||.|||.|.||.||.||||||||..
RBAM_028430__ 600 TCCTGATGATGTCGGCGGACGTTTCTCCGTTCTGACTGCGGTAGGTCTTC 649
BSNT_04619___ 650 TGCCGATTGCTGTCAGCGGCGTCAACATTGATGACATGATGAAAGGCGCC 699
||||||||||.||.|||||.|...|.||.|||||.||||||||||||||.
RBAM_028430__ 650 TGCCGATTGCGGTAAGCGGGGCTGATATCGATGAAATGATGAAAGGCGCT 699
BSNT_04619___ 700 CTGGATGCGAGCAAAGA-TTTTGCAACATCTGAACTGGAAGATAACCCAG 748
||.|||||.|||||||| ||||.||.| ||.|||.|.|||||.|||.|.|
RBAM_028430__ 700 CTTGATGCAAGCAAAGACTTTTCCAGC-TCGGAATTAGAAGAGAACGCGG 748
BSNT_04619___ 749 CATACCAATATGCGGTTGTTCGCAATGTCCTTTATAATAAGGGCAAAACA 798
|.||||||||.||.||.||.|||||.||.||.||||||||.||||.|||.
RBAM_028430__ 749 CTTACCAATACGCCGTCGTCCGCAACGTTCTGTATAATAAAGGCAGAACC 798
BSNT_04619___ 799 ATTGAAATGCTCATCAACTACGAACCGGCGCTTCAATACTTTGCGGAATG 848
|||||||||||.||||||||.||.||.|||||.|||||||||||||||||
RBAM_028430__ 799 ATTGAAATGCTTATCAACTATGAGCCTGCGCTGCAATACTTTGCGGAATG 848
BSNT_04619___ 849 GTGGAAGCAGCTGTTCGGAGAAAGCGAAGGGAAAGATGAGAAGGGCATTT 898
||||||||||||.|||||.|||||.|||||.||||||||.||.|||||.|
RBAM_028430__ 849 GTGGAAGCAGCTCTTCGGCGAAAGTGAAGGAAAAGATGAAAAAGGCATCT 898
BSNT_04619___ 899 ATCCTTCTTCAGCGAACTATTCAACAGACCTTCATTCTTTAGGCCAGTAT 948
||||||||||.||.||||..||||||||||||||.|||.|.||.||.||.
RBAM_028430__ 899 ATCCTTCTTCCGCTAACTTCTCAACAGACCTTCACTCTCTCGGTCAATAC 948
BSNT_04619___ 949 GTACAAGAAGGCCGCAGAGATTTATTCGAAACGGTCCTGAACGTAGAGAA 998
||.||.||||||.|..|.|||.|.||.|||||.||..|.|||||.||.||
RBAM_028430__ 949 GTGCAGGAAGGCAGACGCGATCTGTTTGAAACTGTATTAAACGTTGAAAA 998
BSNT_04619___ 999 GCCTAAACATGAACTGACAATTGAGGAAGCGGATAACGATCTTGACGGCT 1048
.||.||.|||||.|||||||||||.||||||||.||.|||||.|||||||
RBAM_028430__ 999 ACCGAAGCATGAGCTGACAATTGAAGAAGCGGAAAATGATCTCGACGGCT 1048
BSNT_04619___ 1049 TGAACTATTTAGCCGGTAAAACTGTTGATTTCGTTAACAAGAAAGCATTC 1098
|.||.||.||||||||.|||||.||.||||||||.|||||.|||||.|||
RBAM_028430__ 1049 TAAATTACTTAGCCGGCAAAACGGTCGATTTCGTCAACAAAAAAGCGTTC 1098
BSNT_04619___ 1099 CAAGGCACGATGCTTGCCCATACAGACGGAAATGTTCCGAACTTAATCGT 1148
.||||||||||||||||.||||||||||||||.||.|||||||||||.||
RBAM_028430__ 1099 GAAGGCACGATGCTTGCTCATACAGACGGAAAAGTGCCGAACTTAATTGT 1148
BSNT_04619___ 1149 TAACATTCCTGAGCTAAATGCATATACTTTTGGATACCTTGTATATTTCT 1198
.||.|||||.|||||.|||||||||||.||||||||.||.||.|||||||
RBAM_028430__ 1149 CAATATTCCAGAGCTTAATGCATATACATTTGGATATCTCGTCTATTTCT 1198
BSNT_04619___ 1199 TCGAAAAAGC-CTGCGCGATGAGCGGTTACCTCCTTGGCGTCAATCCGTT 1247
|.|||||||| .|| ||||||||||||||.||.||.||.|||||.|||||
RBAM_028430__ 1199 TTGAAAAAGCGGTG-GCGATGAGCGGTTATCTGCTCGGAGTCAACCCGTT 1247
BSNT_04619___ 1248 TGACCAGCCTGGTGTAGAAGCGTATAAAGTCAATATGTTTGCGTTACTCG 1297
|||.|||||.|||||.|||||.|||||.||.||||||||.|||.|.||||
RBAM_028430__ 1248 TGATCAGCCGGGTGTTGAAGCCTATAAGGTGAATATGTTCGCGCTTCTCG 1297
BSNT_04619___ 1298 GCAAACCTGGCTTTGAAGAGAAAAAAGCAGAGCTTGAAAAACGTCTGGAA 1347
|||||||.|||||||||||||||||||||||||||||||||||.||.|||
RBAM_028430__ 1298 GCAAACCGGGCTTTGAAGAGAAAAAAGCAGAGCTTGAAAAACGCCTTGAA 1347
BSNT_04619___ 1348 GATTAA 1353
.|.|||
RBAM_028430__ 1348 AAATAA 1353
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