Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04567 and RBAM_028160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence dna-align/BSNT_04567___gbsA.1.9828.seq
# -bsequence dna-align/RBAM_028160___gbsA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04567___gbsA-RBAM_028160___gbsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04567___gbsA-RBAM_028160___gbsA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04567___gbsA
# 2: RBAM_028160___gbsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1481
# Identity: 1180/1481 (79.7%)
# Similarity: 1180/1481 (79.7%)
# Gaps: 16/1481 ( 1.1%)
# Score: 4638.0
#
#
#=======================================
BSNT_04567___ 1 ATGAGTCAAA---CATTATTCATTGACGGAGAATGGATCAGTGCCGAAAA 47
||||| |||| |.|||| ||.|.|||.|.||||||||||||.|||||
RBAM_028160__ 1 ATGAG-CAAAACGCTTTAT--ATCGGCGGCGGATGGATCAGTGCAGAAAA 47
BSNT_04567___ 48 AGAACAGATCCGCAGTATTATCAACCCATTTAATCAAGAAGAAATTGCAA 97
|.||||||.||||.||||.||.||.|||||||||||||||||||||||||
RBAM_028160__ 48 AAAACAGACCCGCCGTATCATTAATCCATTTAATCAAGAAGAAATTGCAA 97
BSNT_04567___ 98 CTGTAAGCGAGGGAGGGCGAGAGGACGCCATCAAAGCAATCGCAGCCGCA 147
|.|||.||||.||||..||..|.||.||..|.|||||.|||||.||.||.
RBAM_028160__ 98 CGGTATGCGAAGGAGATCGGAACGATGCGGTGAAAGCCATCGCCGCAGCC 147
BSNT_04567___ 148 CGCAGAGCATTTGACAAAGGAGAATGGTCATCGCTATCCGGGCTTGAACG 197
.|.|.|||||||||..||||.||.|||.|...|||.||||||||.||.||
RBAM_028160__ 148 AGAAAAGCATTTGATGAAGGGGAGTGGCCGGTGCTTTCCGGGCTCGAGCG 197
BSNT_04567___ 198 CGGAAAAATTGTTCTGAAAATTGCGGAATTAATCAGACGTGATCTTGAGG 247
||||.||.|||||||||||||||||||||||||||||||.|||||..|.|
RBAM_028160__ 198 CGGACAATTTGTTCTGAAAATTGCGGAATTAATCAGACGCGATCTGAACG 247
BSNT_04567___ 248 AGCTGGCTGAGCTTGAATCTCTTGATACAGGAAAAACACTCGAAGAAAGC 297
|..|.||||||||.|||||.||.||||||||||||||..|.||||||||.
RBAM_028160__ 248 AATTAGCTGAGCTGGAATCGCTCGATACAGGAAAAACGATTGAAGAAAGT 297
BSNT_04567___ 298 AAGGCCGATATGGACGATATCGCCAATGTTTTTCAATATTACGCCGGCTT 347
||.|||||||||||.||||||||.|||||.|||||||||||.|||||.||
RBAM_028160__ 298 AAAGCCGATATGGATGATATCGCAAATGTATTTCAATATTATGCCGGTTT 347
BSNT_04567___ 348 GGCAGACAAAGATGGCGGAGAGATCGTTTCATCTCCGATTCCTGATTCAG 397
|||.||.|||||.||.||.|||.||.||||||||||||||||.|||||.|
RBAM_028160__ 348 GGCGGATAAAGACGGAGGCGAGGTCATTTCATCTCCGATTCCCGATTCCG 397
BSNT_04567___ 398 AAAGCAAAATTATTAGAGAGCCAATCGGGGTTTGCGGCCAGATCACTCCA 447
.|||.|||||..|.||||||||.||.||.||.|||||.||.||.||.||.
RBAM_028160__ 398 TAAGTAAAATCGTCAGAGAGCCCATTGGCGTATGCGGACAAATTACGCCG 447
BSNT_04567___ 448 TGGAATTATCCGCTCCTTCAAGCGAGCTGGAAAATCGCCCCTGCACTGGC 497
|||||.||||||||||||||.|||||||||||||||||.||.||.||.||
RBAM_028160__ 448 TGGAACTATCCGCTCCTTCAGGCGAGCTGGAAAATCGCTCCCGCTCTTGC 497
BSNT_04567___ 498 TGCAGGAAACACAATCGTCATGAAGCCGAGTGAGATTACGCCGCTGACGA 547
.||.||||||||.|||||..|.||||||||.||||||||.||||||||.|
RBAM_028160__ 498 GGCCGGAAACACGATCGTTTTAAAGCCGAGCGAGATTACTCCGCTGACAA 547
BSNT_04567___ 548 CAATCAAAGTCTTTAAGCTGATGGAAGAAGCCGGTGTACCAAAAGGTGTC 597
|.||.|||||||||.|..|.||.||||||||||||.|.||.|||||.|||
RBAM_028160__ 548 CCATTAAAGTCTTTCAATTAATAGAAGAAGCCGGTATTCCGAAAGGGGTC 597
BSNT_04567___ 598 GCAAATCTTGTCCTTGGACCGGGAGCCACAGTGGGCGACGAGCTTGCCGT 647
||.|||||.||.||.||.|||||.|||.|.||.|||||||||||.||...
RBAM_028160__ 598 GCCAATCTCGTGCTGGGGCCGGGCGCCTCTGTCGGCGACGAGCTGGCGAG 647
BSNT_04567___ 648 AAACAAAGACGTCGATTTGATTTCGTTTACGGGCGGAATTGAAACAGGCA 697
||||...|||||||||.||.|.||.|||||||||||||||||||||||||
RBAM_028160__ 648 AAACCTCGACGTCGATCTGGTCTCTTTTACGGGCGGAATTGAAACAGGCA 697
BSNT_04567___ 698 AAAAAATCATGCGGGCGGCAAGCGGAAACGTCAAAAAAATCGCCCTTGAA 747
||||||||||||.||||||||||||.||.||.|||||.||.|||||.||.
RBAM_028160__ 698 AAAAAATCATGCAGGCGGCAAGCGGCAATGTGAAAAAGATTGCCCTGGAG 747
BSNT_04567___ 748 CTTGGCGGGAAAAACCCAAATATTGT-TTTCAAGGACGCGGATTTAGAAG 796
||||||||.|||||.||.|||||.|| |||||| ||.||.|||.|.|||.
RBAM_028160__ 748 CTTGGCGGCAAAAATCCGAATATCGTATTTCAA-GATGCAGATCTCGAAA 796
BSNT_04567___ 797 TTGCGGTTGATCAGGCCTTAAACGCTGTATTTTTCCACGCCGGCCAAGTA 846
..||.|..|||||.||..|.|||||.||.||||||||.|||||||||||.
RBAM_028160__ 797 CAGCTGCAGATCAAGCGCTGAACGCCGTGTTTTTCCATGCCGGCCAAGTT 846
BSNT_04567___ 847 TGCTCTGCAGGTTCCCG-CTTGCTT-GTTGAGGATGCCATTCATGATCAA 894
||.||.|||||.||.|| ||| || ||.||.||.||||||||||||.||
RBAM_028160__ 847 TGTTCGGCAGGGTCACGTCTT--TTGGTGGACGAAGCCATTCATGATGAA 894
BSNT_04567___ 895 TTTTTGGCGGAGCTGGTCAAACGGGCAAAACGCATAAAACTCGGAAACGG 944
|||||.||.||||||.||||.||..|.||||||||.|||.|.||||||||
RBAM_028160__ 895 TTTTTAGCCGAGCTGATCAAGCGCACGAAACGCATCAAATTAGGAAACGG 944
BSNT_04567___ 945 TTTTCATGCTGAGACAGAAAGCGGTCCGCTTATTTCGGCGGAGCACAGGG 994
||||||||..||.||.||||||||||||||.|||||.||.|||||..|||
RBAM_028160__ 945 TTTTCATGAAGATACGGAAAGCGGTCCGCTGATTTCCGCCGAGCATCGGG 994
BSNT_04567___ 995 CAAAGGTAGAAAAATATGTAGAGATCGGAATAGAGGAAGGCGCGAAGCTG 1044
|.||.||.||||||||.|||||.|||||.||.||.|||||.||.||.|||
RBAM_028160__ 995 CCAAAGTCGAAAAATACGTAGAAATCGGCATCGAAGAAGGGGCAAAACTG 1044
BSNT_04567___ 1045 GAGACAGGAGGCAAACGCCCGGAAGACCCTGCGCTTCAAAACGGCTTTTT 1094
||.|||||.||||||||.||.||.||.||.||.|||||||||||.||.||
RBAM_028160__ 1045 GAAACAGGCGGCAAACGTCCTGATGATCCCGCCCTTCAAAACGGTTTCTT 1094
BSNT_04567___ 1095 CTATGAACCTACTATTTTCTCAAACTGTAATTCTGACATGAGAATCGTTC 1144
|||||||||||||||||||||||||||.||.|||||.|||.|.||.||.|
RBAM_028160__ 1095 CTATGAACCTACTATTTTCTCAAACTGCAAGTCTGATATGCGGATAGTCC 1144
BSNT_04567___ 1145 AGGAAGAGGTTTTCGGTCCGGTATTGACAGTCGAAACCTTCAGCTCTGAA 1194
|.||.|||.|.|||||.||.||.||.|||||.||..|.||....||||||
RBAM_028160__ 1145 AAGAGGAGATCTTCGGCCCCGTTTTAACAGTTGAGTCATTTTCTTCTGAA 1194
BSNT_04567___ 1195 GAAGAGGTAATCGAG-CTTGCGAATGATACCATCTATGGCTTGGCTGGAG 1243
|||||.||.||| || |||||.||.||||||||.||.||..||||.||||
RBAM_028160__ 1195 GAAGAAGTGATC-AGACTTGCCAACGATACCATTTACGGGCTGGCCGGAG 1243
BSNT_04567___ 1244 CGGTATGGTCAAAAGACATTGAAAAGTGCGAACGGGTAGCAGCCCGCTTG 1293
|||||||||||||.||.||||||||.||||||||.|||||.|||....||
RBAM_028160__ 1244 CGGTATGGTCAAAGGATATTGAAAAATGCGAACGCGTAGCCGCCAAACTG 1293
BSNT_04567___ 1294 AGAATGGGAACCGTTTGGATCAACGATTTTCATCCGTACTTTGCACAAGC 1343
.|.||||||||.||.||||||||.|||||.||.|||||.||.||.|||||
RBAM_028160__ 1294 CGGATGGGAACGGTATGGATCAATGATTTCCACCCGTATTTCGCGCAAGC 1343
BSNT_04567___ 1344 GCCATGGGGCGGATATAAGCAATCCGGGTTCGGACGCGAGCTTGGAAAAA 1393
||||||||||||.||.||.|||||.||.|||||.|||||.||.||.||||
RBAM_028160__ 1344 GCCATGGGGCGGGTACAAACAATCGGGCTTCGGCCGCGAACTCGGCAAAA 1393
BSNT_04567___ 1394 TAGGCCTTGAAGAATACACAGAAGTCAAACATGTATACCGCAATACAAAA 1443
|.||.||.|||||||||||.|||.||||||||.|.||||||||.||.|||
RBAM_028160__ 1394 TCGGTCTGGAAGAATACACGGAAATCAAACATATTTACCGCAACACGAAA 1443
BSNT_04567___ 1444 CCGGCAGCGGTTAACTGG-TTCAATTCATAA 1473
||.|||.|.||.|||||| ||||| .|||||
RBAM_028160__ 1444 CCTGCACCCGTGAACTGGTTTCAA-GCATAA 1473
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