Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04566 and RBAM_028150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence dna-align/BSNT_04566___gbsB.1.9828.seq
# -bsequence dna-align/RBAM_028150___gbsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04566___gbsB-RBAM_028150___gbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04566___gbsB-RBAM_028150___gbsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04566___gbsB
# 2: RBAM_028150___gbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1214
# Identity: 991/1214 (81.6%)
# Similarity: 991/1214 (81.6%)
# Gaps: 19/1214 ( 1.6%)
# Score: 4099.0
#
#
#=======================================
BSNT_04566___ 1 ATGATGACATTAAATATGAAGGTAGAAAGCATGCAGAAATTCCACACATT 50
|||||.||||||||||||||.||||||||.|||||
RBAM_028150__ 1 ---------------ATGAAAGTAGAAAGCATGCATAAATTCCATACATT 35
BSNT_04566___ 51 TGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACGG 100
.|||||.|||||.||.|||||.||.||||||||.||.||..||||..|||
RBAM_028150__ 36 CGAAATCCCGACAGTCATTAAACACGGAATCGGTGCGATTCAGCACGCGG 85
BSNT_04566___ 101 GTGAG-GAAGT-AGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTCACAG 148
| .|| ||||| || .||.||.|||||..||||||||||.||.||.||||
RBAM_028150__ 86 G-AAGTGAAGTCAG-AGCGCTTGGCGTCACAAAAGCGCTGCTCGTAACAG 133
BSNT_04566___ 149 ACCCAGGGATTTATAAAGCCGGTGTTGCTGATCCTGTAATCGAATCACTT 198
||||.||.||||||||.||.||.||.||..|.||.||.||.|||||..|.
RBAM_028150__ 134 ACCCGGGAATTTATAACGCGGGAGTGGCAAACCCGGTCATTGAATCTTTG 183
BSNT_04566___ 199 AAAGAAGCAGGCATTGAAGTGGTGCTCTTTAATAAAGTTGAGCCAAACCC 248
.|.|||||.|||||.|||||.||.||.|||||.|||||.|||||.|||||
RBAM_028150__ 184 CAGGAAGCGGGCATCGAAGTCGTCCTGTTTAACAAAGTGGAGCCGAACCC 233
BSNT_04566___ 249 GCCTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAGAGAACT 298
||||||.|||||.||.||.||||||||.||.||.||.||||||||.||||
RBAM_028150__ 234 GCCTGTACGTCTTGTAAACGAAGGATCAGAACTGTATAAAAAAGAAAACT 283
BSNT_04566___ 299 GTAATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACAGCAAAA 348
|.||.||..|.|||||.|||||.|||||||||||||||||||||||.|||
RBAM_028150__ 284 GCAACGGCCTTGTGGCTGTCGGCGGCGGAAGCTCCATGGATACAGCGAAA 333
BSNT_04566___ 349 GCAATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTATGAAGC 398
||.|||||.|||||||||||.|||||||||||.|||||||||||||||||
RBAM_028150__ 334 GCGATCGGGGTAGAAGCGACACACGAAGGAAGTGTGCTTGATTATGAAGC 383
BSNT_04566___ 399 GGCAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGACGACAA 448
.||.||.||.|||||.||||||||||||||.||||||||||||||.||.|
RBAM_028150__ 384 CGCGGAAGGCAAAAAGCCGCTGGAAAACCGTATTCCTCCGCTGACAACGA 433
BSNT_04566___ 449 TTCCCACTACAGCTGGAACAGGATCAGAAGTAACCCAATGGGCGGTTATC 498
|.||.||.||.||.||||||||.|||||.||.||.|||||||||||.||.
RBAM_028150__ 434 TCCCGACGACTGCGGGAACAGGTTCAGAGGTCACACAATGGGCGGTCATT 483
BSNT_04566___ 499 ACAGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCTGATTGC 548
||||||||.|||||||||||.||||||||.||||||||.|||||.||.||
RBAM_028150__ 484 ACAGATGAGGAAAGAGAATTTAAATTCAATACGGGCGGACCGCTTATCGC 533
BSNT_04566___ 549 AGCGCACTTGACCATCATTGATCCTGAGCTTCATGTTTCAATGCCTCCGC 598
.|||||.||.||..|||||||.||||||||.||....||.||||||||||
RBAM_028150__ 534 CGCGCATTTAACAGTCATTGACCCTGAGCTGCACACGTCCATGCCTCCGC 583
BSNT_04566___ 599 ATGTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATTGAGTGC 648
||||.||.||.|||||.||.|||||.||.||.||.||.|||||.||||||
RBAM_028150__ 584 ATGTGACGGCCATGACAGGTATTGACGCACTTGCGCACGCCATCGAGTGC 633
BSNT_04566___ 649 TATACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTTAATGGC 698
|||||.||||||||.||.|||||.|||||.|||||.||.||.||||||||
RBAM_028150__ 634 TATACGATGAAATTCGCGCAGCCGATCACTGATGCCGTCGCTTTAATGGC 683
BSNT_04566___ 699 GATTGAGTATGCCGCTCATTACATTAAGAGGGCATTTGCTGACGGAGAGG 748
.|||||.|||||.||.|||||.||||||.|.||.|||||.||||||||||
RBAM_028150__ 684 CATTGAATATGCGGCGCATTATATTAAGCGCGCGTTTGCGGACGGAGAGG 733
BSNT_04566___ 749 ATCTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCCGGTCTT 798
||.||||||||||.|||||.|||||||||||.||||||||||||||.|||
RBAM_028150__ 734 ATTTGGAAGCAAGATACGGCATGGCGCAGGCGGCGATGCTTGCCGGCCTT 783
BSNT_04566___ 799 TCTTACGGAAGTGAATCAGCGGGCGCGGCTCATGCGATGAGCCAAACGCT 848
||.|||||.|||||||||||.||||||||.||||||||||||||.|||||
RBAM_028150__ 784 TCATACGGCAGTGAATCAGCAGGCGCGGCGCATGCGATGAGCCAGACGCT 833
BSNT_04566___ 849 TGGCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGATGATGG 898
.|||||.||.|||||.|||||||||||.|||||.||.||.||.|||||||
RBAM_028150__ 834 CGGCGGCATCATCCCTGTCGCTCACGGACAATGCGTCGCAGCTATGATGG 883
BSNT_04566___ 899 GCCCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTTGCGCGT 948
|.||.||.|||||||||||||||||.||||||||.||.||.||.||.||.
RBAM_028150__ 884 GGCCGGTAATGGAATACAACTGGAAAGGCTATCCGGAAAAATTCGCCCGC 933
BSNT_04566___ 949 ATTGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGAAGAAGC 998
||.||.|||||.|||||.||.|||||||||||.||||||||.||||||||
RBAM_028150__ 934 ATCGCCAAAGCATTCGGAATCGATACAAGCAACATGACAACCGAAGAAGC 983
BSNT_04566___ 999 TGCGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATTTAGAAG 1048
.||.|||||.||.|||||.||||||||||||||.||..||||||||||.|
RBAM_028150__ 984 GGCAAAAGCGTCCGTCAACTGGATGTATGATCTTGTAAAAGATTTAGAGG 1033
BSNT_04566___ 1049 TGCCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAACGCTTG 1098
||||||.|||||||||.||.||.||.||.||.||.|||||.|||||.||.
RBAM_028150__ 1034 TGCCGAGTTTAGAAGAACAAGGTGTGTCTCCGGACATGATTGAACGTTTA 1083
BSNT_04566___ 1099 TCTAAAGAAGCTATGAAAGATCCGCAAACCTTCGGAAACCCTAGAGATTT 1148
||.||||||||.|||||||||||||||||.||||||||.||.||||||||
RBAM_028150__ 1084 TCAAAAGAAGCCATGAAAGATCCGCAAACTTTCGGAAATCCAAGAGATTT 1133
BSNT_04566___ 1149 AAATGAAAAAGCATACAACTGGATCTACAAGCGCTGCTTTAACCTTACGC 1198
.|||||.|||||||||||||||||.|||||.|||||||||.||.|.||||
RBAM_028150__ 1134 GAATGAGAAAGCATACAACTGGATTTACAAACGCTGCTTTGACTTAACGC 1183
BSNT_04566___ 1199 CTAAAACGGTATAA 1212
|.||||||||||||
RBAM_028150__ 1184 CGAAAACGGTATAA 1197
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