Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04559 and RBAM_028110
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04559___yuaG.1.9828.seq
# -bsequence dna-align/RBAM_028110___yuaG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04559___yuaG-RBAM_028110___yuaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04559___yuaG-RBAM_028110___yuaG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04559___yuaG
# 2: RBAM_028110___yuaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1534
# Identity: 1231/1534 (80.2%)
# Similarity: 1231/1534 (80.2%)
# Gaps: 8/1534 ( 0.5%)
# Score: 4933.0
#
#
#=======================================
BSNT_04559___ 1 ATGACAATGCCGATTATAATGATCATCGGAGTTGTATTCTTTTTATTAAT 50
|||||.|||||||||||.||..|.||||||.|.||||||||||||.|.||
RBAM_028110__ 1 ATGACTATGCCGATTATCATCGTTATCGGAATCGTATTCTTTTTACTCAT 50
BSNT_04559___ 51 TGCACTAATAGCTGTGTTTATTACGAAGTATCGTACAGCAGGGCCTGATG 100
.|||||.||.|||||.||||||||||||||.||.||.||.|||||.||.|
RBAM_028110__ 51 CGCACTTATTGCTGTATTTATTACGAAGTACCGGACGGCGGGGCCGGACG 100
BSNT_04559___ 101 AAGCGTTAATTGTAACGGGGAGCTATCTGGGCAATAAAAATGTTCATGTC 150
||||..|.||.||.||.||.||.|||.||||.|||||.||.||.||..|.
RBAM_028110__ 101 AAGCCCTTATCGTGACCGGAAGTTATTTGGGAAATAAGAACGTCCACATT 150
BSNT_04559___ 151 GATGAAGGCGGCAACCGTATTAAAATCGTCCGCGGCGGAGGAACCTTTGT 200
|||||||||||.||.|||.|.|||||||||||.|||||.|||||.||.||
RBAM_028110__ 151 GATGAAGGCGGAAATCGTCTGAAAATCGTCCGGGGCGGGGGAACGTTCGT 200
BSNT_04559___ 201 CCTTCCCGTCTTCCAGCAGGCAGAGCCGCTAAGCCTATTATCAAGCAAAC 250
.||.||.||.||||||||||||||.||.||.||..||.|.||||||||||
RBAM_028110__ 201 GCTCCCGGTATTCCAGCAGGCAGAACCTCTCAGTTTACTGTCAAGCAAAC 250
BSNT_04559___ 251 TCGATGTTTCGACACCTGAAGTCTATACAGAACAAGGAGTGCCAGTAATG 300
|.|||||.||.|||||.||||||||||||||.|||||.|||||.||||||
RBAM_028110__ 251 TTGATGTCTCTACACCCGAAGTCTATACAGAGCAAGGCGTGCCGGTAATG 300
BSNT_04559___ 301 GCCGATGGAACTGCGATTATTAAAATCGGCGGTTCTATAGGAGAAATCGC 350
|||||||||||.||.||||||||||||||.||.|||||..|.||||||||
RBAM_028110__ 301 GCCGATGGAACCGCCATTATTAAAATCGGAGGCTCTATCAGTGAAATCGC 350
BSNT_04559___ 351 TACAGCGGCCGAACAATTTTTAGGGAAATCAAAAGACGACCGTGAGCAGG 400
.|||||.||.|||||||||||.||||||||.||.||.|||||||||||||
RBAM_028110__ 351 AACAGCAGCTGAACAATTTTTGGGGAAATCTAAGGAAGACCGTGAGCAGG 400
BSNT_04559___ 401 AAGCGCGGGAGGTTTTAGAAGGCCACCTTCGTTCCATTCTCGGCTCAATG 450
|.|||||||||||..|.||||||||.||.||.|||||.||||||||.|||
RBAM_028110__ 401 AGGCGCGGGAGGTGCTGGAAGGCCATCTGCGCTCCATCCTCGGCTCCATG 450
BSNT_04559___ 451 ACAGTAGAAGAAATCTATAAAAACAGAGAAAAATTCTCTCAAGAGGTGCA 500
||.||.|||||.||.|||||||||||.|||||.||.|||||.||.||.||
RBAM_028110__ 451 ACCGTTGAAGAGATTTATAAAAACAGGGAAAAGTTTTCTCAGGAAGTCCA 500
BSNT_04559___ 501 GCGTGTCGCTTCACAGGATCTCGCGAAAATGGGGCTGGTAATCGTCTCGT 550
|||.|||||.||.||||||||.||.|||||||||||.||.|||||.||.|
RBAM_028110__ 501 GCGGGTCGCGTCTCAGGATCTTGCTAAAATGGGGCTCGTGATCGTTTCTT 550
BSNT_04559___ 551 TTACCATTAAAGATGTTCGTGATAAAAACGGTTATCTTGAATCATTAGGG 600
||||.||||||||.||.||.|||||||||||.|||||||||||||||||.
RBAM_028110__ 551 TTACGATTAAAGACGTCCGCGATAAAAACGGCTATCTTGAATCATTAGGT 600
BSNT_04559___ 601 AAACCGAGAATTGCCCAAGTAAAACGCGATGCTGATATCGCAACAGCAGA 650
||.||||||||.||||||||.||.||.|||||.||.||.||.||.|||||
RBAM_028110__ 601 AAGCCGAGAATCGCCCAAGTCAAGCGGGATGCGGACATTGCCACGGCAGA 650
BSNT_04559___ 651 GGCTGATAAAGAAACCCGAATTAAGCGGGCAGAAGCCGATAAAGACGCAA 700
.||.||||||||.||..|.|||||.||.||.|..||.|||||||||||||
RBAM_028110__ 651 AGCGGATAAAGAGACGAGGATTAAACGCGCGGCCGCTGATAAAGACGCAA 700
BSNT_04559___ 701 AAAAATCAGAACTTGAACGGGCGACGGAAATCGCTGAAGCTGAAAAACTC 750
||||||||||.||.||.||||||||||||||.||||||||.||||||.||
RBAM_028110__ 701 AAAAATCAGAGCTGGAGCGGGCGACGGAAATAGCTGAAGCGGAAAAAATC 750
BSNT_04559___ 751 AATCAGCTCAAAATGGCTGAATTCCGCAGAGAACAAGATACGGCAAAAGC 800
||||||||.||||||||.||||.|.|.|||||.||.|||||.||||||||
RBAM_028110__ 751 AATCAGCTGAAAATGGCGGAATACAGAAGAGAGCAGGATACAGCAAAAGC 800
BSNT_04559___ 801 GAATGCCGACCAAGCATATGATTTAGAGACTGCCAGAGCGCGCCAGCAAG 850
.|||||||||||.|||||||||.|.||.||.||.|.|||.||||||||.|
RBAM_028110__ 801 CAATGCCGACCAGGCATATGATCTTGAAACAGCAAAAGCCCGCCAGCAGG 850
BSNT_04559___ 851 TCACAGAGCAGGAAATGCAGGTTAAAATTATCGAACGCCAAAAACAAATA 900
|.|||||||||||||||||..||||||||||.||.||.|||||.||.||.
RBAM_028110__ 851 TGACAGAGCAGGAAATGCAAATTAAAATTATTGAGCGGCAAAAGCAGATT 900
BSNT_04559___ 901 GAGCTAGAAGAAAAAGAAATTCTTCGCCGTGAACGTCAATACGACTCAGA 950
||..|.||.||||||||||||||.||||||||.||.|||||.|||||.||
RBAM_028110__ 901 GAATTGGAGGAAAAAGAAATTCTGCGCCGTGAGCGCCAATATGACTCTGA 950
BSNT_04559___ 951 GGTAAAGAAAAAAGCCGATGCAGACCGTTATTCTGTTGAGCAGTCCGCAG 1000
.||.|||||||||||||||||.||||||||.||.||.||.||..|.||.|
RBAM_028110__ 951 AGTGAAGAAAAAAGCCGATGCTGACCGTTACTCGGTGGAACAAGCGGCCG 1000
BSNT_04559___ 1001 CAGCTGAGAAAGCCAAACAGCTCGCGGAAGCCGATGCCAAGAAGTACAGT 1050
|.||.|..|||||.||.||||||||.|||||.||||||.||.||||||||
RBAM_028110__ 1001 CGGCCGCAAAAGCGAAGCAGCTCGCAGAAGCGGATGCCGAGCAGTACAGT 1050
BSNT_04559___ 1051 ATTGAAGCAATGGCAAAGGCTGAGGCGGAAAAAGTAAGAATTGACGGGCT 1100
||.|||||.|||||.|||||.||.||||||...||.|||||||.|||.||
RBAM_028110__ 1051 ATCGAAGCGATGGCCAAGGCGGAAGCGGAACGCGTGAGAATTGCCGGTCT 1100
BSNT_04559___ 1101 AGCAAAAGCAGAAGCGGAAAAAGCGAAAGGAGAGACAGAGGCAGAGGTTA 1150
.||.|||||.||.||.|||||.||||.||||||.||.||.||.||.||.|
RBAM_028110__ 1101 TGCTAAAGCGGAGGCTGAAAAGGCGAGAGGAGAAACCGAAGCGGAAGTCA 1150
BSNT_04559___ 1151 TCCGCCTGAAAGGTCTTGCAGAAGCGGAAGCAAAAGAGAAAATTGCGGCT 1200
||||||||||||||||.||||||||||||||.|||||.|||||.||.|..
RBAM_028110__ 1151 TCCGCCTGAAAGGTCTCGCAGAAGCGGAAGCTAAAGAAAAAATCGCCGAA 1200
BSNT_04559___ 1201 GCCTTTGAACAGTACGGGCAGGCGGCGATTTTCGATATGATTGTCAAAAT 1250
||.||.|||.|.|||||||||||.||.||..|.|||||||||||.|||||
RBAM_028110__ 1201 GCATTCGAAAAATACGGGCAGGCTGCAATCCTTGATATGATTGTGAAAAT 1250
BSNT_04559___ 1251 GCTTCCGGAATACGCGAAACAAGCAGCGGCGCCTCTTTCAAATATTGATA 1300
|||.||.|||||.|||||.||||...|.|||||||||||.||.|||||||
RBAM_028110__ 1251 GCTGCCTGAATATGCGAAGCAAGTCTCAGCGCCTCTTTCCAACATTGATA 1300
BSNT_04559___ 1301 AAATCACCGTTGTCGATACAGGAGGAAGCGGTGAATCAA--GCGGAGCAA 1348
||||.|||||.||.|||||.||||||||||||||| || ||||.||.|
RBAM_028110__ 1301 AAATAACCGTCGTTGATACGGGAGGAAGCGGTGAA--AACGGCGGGGCCA 1348
BSNT_04559___ 1349 ACAAAGTAACCAGCTATGCGACGAACTTAATGTCAAGTCTGCAAGAAAGT 1398
|.|||||.||..||||.||.||.||.||||||.|..||||.||.|||||.
RBAM_028110__ 1349 ATAAAGTCACAGGCTACGCAACCAATTTAATGGCCGGTCTTCAGGAAAGC 1398
BSNT_04559___ 1399 TTAAAAGCATCCTCAGGAATTGATGTAAAAGAAATGCTTGAGAACTTTTC 1448
|||||||||||.||.|||||..||||||||||..|..|||||||.|||||
RBAM_028110__ 1399 TTAAAAGCATCTTCCGGAATCAATGTAAAAGAGCTTATTGAGAATTTTTC 1448
BSNT_04559___ 1449 AGGAAAAGGAAACGTAAAACAAAGCATTAATGAATTAACAAATGAAATCA 1498
|||.|||||.|||.||||||||||.||.||||||.|.|||||.|||.|.|
RBAM_028110__ 1449 AGGCAAAGGCAACATAAAACAAAGTATAAATGAACTTACAAAAGAACTGA 1498
BSNT_04559___ 1499 AAGAAGCCAA--AACGGTCCAAAAATCAGAGTAA 1530
..||..|.|| ||||| ||.|...|.||.|||
RBAM_028110__ 1499 GTGATTCGAACGAACGG--CACAGCCCGGAATAA 1530
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