Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04498 and RBAM_027830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04498___ytaB.1.9828.seq
# -bsequence dna-align/RBAM_027830___ytaB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04498___ytaB-RBAM_027830___ytaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04498___ytaB-RBAM_027830___ytaB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04498___ytaB
# 2: RBAM_027830___ytaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 488
# Identity: 337/488 (69.1%)
# Similarity: 337/488 (69.1%)
# Gaps: 37/488 ( 7.6%)
# Score: 1087.0
#
#
#=======================================
BSNT_04498___ 1 ATGAAAAAGA---TTGTCGGCGC-----TTTAGCCGTTTTTGTAATTACA 42
|||||||||| .|.||||.|| || ||.|||.|.||||||
RBAM_027830__ 1 ATGAAAAAGAAGTATATCGGTGCGATTATT-----GTATTTATCATTACA 45
BSNT_04498___ 43 TATGCGCTGTTTTC---AGCCGCAGGCTACCTGTTTCCTGTGGACCAAGA 89
||||...||||||| |||.| ||.| .||.|||||..|.||||..||
RBAM_027830__ 46 TATGTCTTGTTTTCTTTAGCGG--GGGT-TCTCTTTCCCATCGACCGTGA 92
BSNT_04498___ 90 ATGGTACAATTCATTGAAAAAACCGGACTGGACGCCAAGCGTAACTGCGA 139
||||||..|..||.||.|||||||.|||||||||||.||||.|.|.|.||
RBAM_027830__ 93 ATGGTATGACGCACTGCAAAAACCTGACTGGACGCCGAGCGGATCAGTGA 142
BSNT_04498___ 140 TCGGCATCATTTGGGCCACCCTGTTTGCCCTGATCTCCCTTTCAGCAGCC 189
||||||||||.|||||.....|||||||.||.||.||.||.|||||||||
RBAM_027830__ 143 TCGGCATCATATGGGCGGTTTTGTTTGCGCTTATTTCGCTCTCAGCAGCC 192
BSNT_04498___ 190 ATTG-TATATGCTGCGTTTTCATTTAAAGGTGCGA----AAAGC-TTTCG 233
||| ||||.||...||||||||.|||| || ||||| |||.|
RBAM_027830__ 193 -TTGATATACGCAAAGTTTTCATGTAAA-----GAATCCAAAGCTTTTTG 236
BSNT_04498___ 234 GTTTACACTTTTGATAAATTA---CGTGCTCAATCAAGCCTTCAGCTATT 280
|.|.|..|||.|.|..||||| |||| |||||||..||||||||||
RBAM_027830__ 237 GGTGATGCTTCTCACCAATTATATCGTG---AATCAAGGATTCAGCTATT 283
BSNT_04498___ 281 TCCAGTTTACGCAAAAAAATCTGCTGGCTGCATCGCTTGACTGCCTGCTT 330
|.||.||.||.||.||||||.||||.||||||||..|.||.|||||||||
RBAM_027830__ 284 TTCAATTCACACAGAAAAATTTGCTTGCTGCATCTATCGATTGCCTGCTT 333
BSNT_04498___ 331 GTCGCCATCACAGCAATCGTATTACTGATCATTGCCAAAAAATACAACAG 380
||.||..|.|||.||.||.|..|..||.||||||||...|||||||..|.
RBAM_027830__ 334 GTGGCGGTGACAACACTCATTCTGTTGCTCATTGCCGGTAAATACAGTAA 383
BSNT_04498___ 381 AGCCGCAAGCTATCTTCTTTTGCCTTATTATTTATGGAGTGCATTTGCGA 430
|||..||..||..|||||..|.|||||||..|||||||||||.|||||.|
RBAM_027830__ 384 AGCTTCAGCCTGGCTTCTGGTTCCTTATTTATTATGGAGTGCTTTTGCCA 433
BSNT_04498___ 431 CGTTCTTATCCTTTACAATCAATTCAATGAATCTGTGA 468
|.|.|.|.||.|||||.||..||.|.|||||....|.|
RBAM_027830__ 434 CATACCTGTCTTTTACCATTTATGCTATGAACGCATAA 471
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