Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04482 and RBAM_027780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:59
# Commandline: needle
# -asequence dna-align/BSNT_04482___menB.1.9828.seq
# -bsequence dna-align/RBAM_027780___menB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04482___menB-RBAM_027780___menB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04482___menB-RBAM_027780___menB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04482___menB
# 2: RBAM_027780___menB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity: 676/822 (82.2%)
# Similarity: 676/822 (82.2%)
# Gaps: 9/822 ( 1.1%)
# Score: 2780.0
#
#
#=======================================
BSNT_04482___ 1 ATGGCT---GAATGGAAAACAAAACGGACA-TACGATGAGATATTGTATG 46
|||||| ||||||||||...||| |.|| ||||||||.||..||||.|
RBAM_027780__ 1 ATGGCTGCAGAATGGAAAAGTGAAC-GTCAGTACGATGAAATCCTGTACG 49
BSNT_04482___ 47 AAACGTATAATGGCATTGCAAAAATAACAATCAACCGACCTGAGGTACAT 96
|.||||||||.||.|||||||||||||||||.|||||.||.|||||||||
RBAM_027780__ 50 AGACGTATAACGGTATTGCAAAAATAACAATTAACCGCCCGGAGGTACAT 99
BSNT_04482___ 97 AATGCGTTTACCCCTAAAACGGTTGCTGAAATGATTGATGCGTTTGCTGA 146
||.||.|||||.|||||.|||||..|.|||||||||||.||||||||...
RBAM_027780__ 100 AACGCATTTACTCCTAAGACGGTATCAGAAATGATTGACGCGTTTGCCCG 149
BSNT_04482___ 147 CGCAAGAGACGA--CCAAAACGTTGGGGTTATCGTGCTTGCCGGTGCAGG 194
.|||.|.||.|| ||||.| ||||.||.|||||.|||||.||.||.||
RBAM_027780__ 150 TGCACGTGATGACTCCAATA--TTGGTGTCATCGTTCTTGCGGGAGCGGG 197
BSNT_04482___ 195 GGACAAGGCATTTTGTTCTGGCGGAGACCAAAAAGTGCGCGGCCACGGTG 244
.||.||.|||||.|||||.||||||||.||||||||.|||||.|||||.|
RBAM_027780__ 198 AGATAAAGCATTCTGTTCAGGCGGAGATCAAAAAGTCCGCGGTCACGGCG 247
BSNT_04482___ 245 GATATGTAGGAGACGACCAGATCCCGCGTCTTAACGTATTGGATCTTCAG 294
|||||||.||||||||.||||||||||||||.||.||..|.|||||||||
RBAM_027780__ 248 GATATGTCGGAGACGATCAGATCCCGCGTCTGAATGTGCTTGATCTTCAG 297
BSNT_04482___ 295 CGTTTAATCCGCGTCATCCCGAAACCGGTTGTTGCGATGGTGTCCGGATA 344
|||||.||||||||.||.||.||||||||.||.||.|||||.||.||.||
RBAM_027780__ 298 CGTTTGATCCGCGTTATTCCTAAACCGGTCGTAGCAATGGTATCAGGCTA 347
BSNT_04482___ 345 TGCGATTGGCGGAGGCCATGTGCTTCACATCGTATGTGACTTGACAATTG 394
|||.||.||||||||||||||||||||.|||||.|||||.||.||.||||
RBAM_027780__ 348 TGCCATCGGCGGAGGCCATGTGCTTCATATCGTCTGTGATTTAACGATTG 397
BSNT_04482___ 395 CTGCGGACAACGCAATTTTTGGACAAACAGGCCCTAAAGTTGGAAGCTTC 444
|.||.||.|||||.|||||.||.|||||.||.||.|||||.||||||||.
RBAM_027780__ 398 CAGCCGATAACGCGATTTTCGGTCAAACCGGACCGAAAGTGGGAAGCTTT 447
BSNT_04482___ 445 GATGCAGGTTACGGTTCTGGCTACCTGGCTCGAATTGTAGGACATAAAAA 494
|||||.||||||||.||.||.||||||||.||.||.||.||||||||.||
RBAM_027780__ 448 GATGCCGGTTACGGCTCAGGTTACCTGGCGCGTATCGTCGGACATAAGAA 497
BSNT_04482___ 495 AGCACGTGAAATCTGGTACCTATGCCGTCAGTACAACGCACAGGAAGCAC 544
|||.|||||||||||||||||.||||||||.||||||||.||||||||.|
RBAM_027780__ 498 AGCCCGTGAAATCTGGTACCTGTGCCGTCAATACAACGCGCAGGAAGCGC 547
BSNT_04482___ 545 TGGACATGGGTCTTGTCAACACAGTCGTTCCTTTGGAACAGCTTGAAGAA 594
|.||||||||.||||||||.|||||.||.||.||.||..|.||||||||.
RBAM_027780__ 548 TCGACATGGGGCTTGTCAATACAGTTGTCCCATTAGAGAAACTTGAAGAG 597
BSNT_04482___ 595 GAAACGATTAAATGGTGTGAAGAAATGCTTGAAAAAAGCCCGACCGCACT 644
|||||.||||||||||||||||||||||||||.||||||||.||.||.||
RBAM_027780__ 598 GAAACAATTAAATGGTGTGAAGAAATGCTTGAGAAAAGCCCTACAGCCCT 647
BSNT_04482___ 645 GCGCTTTCTTAAAGCTGCGTTTAACGCGGACACAGACGGACTTGCTGGAA 694
.||.||.||||||||.||.||||||||.||.||||||||.||.||.||||
RBAM_027780__ 648 TCGTTTCCTTAAAGCGGCATTTAACGCTGATACAGACGGCCTCGCCGGAA 697
BSNT_04482___ 695 TTCAGCAGTTTGCAGGGGATGCTACCCTTCTTTACTACACAACAGATGAA 744
|||||||.||||||||.|||||.||.||||||||.|||||.||.||.|||
RBAM_027780__ 698 TTCAGCAATTTGCAGGAGATGCAACGCTTCTTTATTACACGACTGACGAA 747
BSNT_04482___ 745 GCAAAAGAAGGCCGTGATTCCTTTAAGGAAAAACGCAAACCTGATTTCGG 794
||.|||||||||||.|||||||||||.||.|||||||..||.||||||||
RBAM_027780__ 748 GCGAAAGAAGGCCGCGATTCCTTTAAAGAGAAACGCAGTCCCGATTTCGG 797
BSNT_04482___ 795 ACAGTTCCCTCGTTTCCCGTGA 816
.||||||||||||||.||||||
RBAM_027780__ 798 TCAGTTCCCTCGTTTTCCGTGA 819
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