Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04471 and RBAM_027740
See
Amino acid alignment /
Visit
BSNT_04471 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04471___ythC.1.9828.seq
# -bsequence dna-align/RBAM_027740.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04471___ythC-RBAM_027740.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04471___ythC-RBAM_027740.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04471___ythC
# 2: RBAM_027740
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 159
# Identity: 133/159 (83.6%)
# Similarity: 133/159 (83.6%)
# Gaps: 0/159 ( 0.0%)
# Score: 561.0
#
#
#=======================================
BSNT_04471___ 1 ATGGAGCAGAAAATTCTATGTGAGGTCAACAACTGTTCTTATTGGGGCAA 50
|||||.||.||||||||.|||||.|||||.||||||||.||||||||||.
RBAM_027740 1 ATGGACCAAAAAATTCTGTGTGAAGTCAATAACTGTTCATATTGGGGCAG 50
BSNT_04471___ 51 AGGTAACAAATGCACCGCTGATACCATTTATGTTGTCAGCCATACTGGTG 100
|||.|||||||||||.||.||..|.||||||||.|||||||||||.||.|
RBAM_027740 51 AGGAAACAAATGCACGGCCGACGCGATTTATGTGGTCAGCCATACAGGCG 100
BSNT_04471___ 101 AAACGGCTGAAAACAGCCGGGAAACAGACTGCAAAACGTTTAAGCCGCAT 150
||||.||||||||.||....|||||.||.||||||||.|||||.||||||
RBAM_027740 101 AAACCGCTGAAAAAAGTGAAGAAACGGATTGCAAAACCTTTAAACCGCAT 150
BSNT_04471___ 151 GATTTATAA 159
|||||||||
RBAM_027740 151 GATTTATAA 159
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.