Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04470 and RBAM_027730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04470___ythB.1.9828.seq
# -bsequence dna-align/RBAM_027730___ythB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04470___ythB-RBAM_027730___ythB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04470___ythB-RBAM_027730___ythB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04470___ythB
# 2: RBAM_027730___ythB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1042
# Identity: 785/1042 (75.3%)
# Similarity: 785/1042 (75.3%)
# Gaps: 2/1042 ( 0.2%)
# Score: 2885.0
#
#
#=======================================
BSNT_04470___ 1 ATGGAGATTTCAACTGACGCTCTGATCGCCATCTCAATTATCTGGGGCTT 50
|||||.|||.|.|..||.|||||.||.||.||.|||||..|.||||||||
RBAM_027730__ 1 ATGGACATTACCATGGATGCTCTCATTGCGATATCAATCGTATGGGGCTT 50
BSNT_04470___ 51 TGTGTTTATTTACGCCGTCATGGCGACAATGGATTTTGGAGCGGGATTTT 100
.||||||||.|||||.||||||||.||.|||||.||.|||||.||.||||
RBAM_027730__ 51 CGTGTTTATCTACGCGGTCATGGCAACGATGGACTTCGGAGCCGGCTTTT 100
BSNT_04470___ 101 GGTCTATGATCTATTTAAACAAGGAGCATATGAAGGCCACCGATATTGCG 150
||||.|||||.||||||||.||.||.||.|..|||||.||..|.||.||.
RBAM_027730__ 101 GGTCGATGATTTATTTAAATAAAGAACAAACAAAGGCGACAAACATCGCC 150
BSNT_04470___ 151 AATCGCTTTTTGTCCCCGACTTGGGAGGTCACAAACGTCTTTATTGTGGC 200
||.||.|.||||||||||||.|||||.||.||.|||||||||||.||.||
RBAM_027730__ 151 AACCGTTATTTGTCCCCGACATGGGAAGTGACCAACGTCTTTATCGTCGC 200
BSNT_04470___ 201 CATCGTCGTGGCGCTTTTCAGTTTTTTCCCCGGCGCGACATTTGTGCTCG 250
.|||||.||.||.||.|||||.||.||.||.||.||.||.||.|||||.|
RBAM_027730__ 201 AATCGTTGTCGCCCTATTCAGCTTCTTTCCAGGGGCAACCTTCGTGCTGG 250
BSNT_04470___ 251 GCACCGTTTTATTAATTCCCGGAAGCATGATTTTACTGCTTTTAGCGATT 300
|.|||||||||||.||.||.||.||.||.|||||.|||||||||||.||.
RBAM_027730__ 251 GAACCGTTTTATTGATCCCGGGGAGTATTATTTTGCTGCTTTTAGCCATC 300
BSNT_04470___ 301 CGAAGCGGATTTCTCGTGTTTTCAAATACAGCAAAGGAGCGGAAAACGCT 350
||.|||||.||||||||.||.||.|||||.||.|||||..|.||||...|
RBAM_027730__ 301 CGCAGCGGCTTTCTCGTTTTCTCCAATACGGCGAAGGAAAGAAAAATCAT 350
BSNT_04470___ 351 AAGATATATTTCCGGCATCTCCGGCTTTATCATTCCTGCTATTTTAATTT 400
.||||||||.|||||.||.||.|||||.||.|||||.|||.|..|.||||
RBAM_027730__ 351 GAGATATATCTCCGGAATTTCGGGCTTCATTATTCCCGCTGTGCTGATTT 400
BSNT_04470___ 401 TGGTGCTTCCTGTGACACACGGAGGGTTTATAGAAAAAACGGATGGAATC 450
||||.|||||.||.|||||||||||.|||||.||.||.||||..||..|.
RBAM_027730__ 401 TGGTCCTTCCGGTCACACACGGAGGATTTATTGAGAAGACGGGCGGCGTG 450
BSNT_04470___ 451 TATAACTTAAATATGTCTAAAATCTTTTCAAGCCCCAACGCCTATTCATT 500
|||.||.|.|||.||.|.||..|||||.||||||..||.||.|||.|.||
RBAM_027730__ 451 TATCACCTGAATTTGGCAAATGTCTTTACAAGCCTTAATGCGTATGCGTT 500
BSNT_04470___ 501 TATCGGGTTTGCGATTTTAAGCACCTTATTTTTGTCCTCGCTGCTGCTTG 550
||||||.|||||.|||||||||||.||||||||.||.||.|||||.||.|
RBAM_027730__ 501 TATCGGCTTTGCCATTTTAAGCACTTTATTTTTATCTTCACTGCTTCTGG 550
BSNT_04470___ 551 CAGATGTTTCAAATGTGGCAGAGGAACAGGATGCGTACCGAGCCTACAGA 600
|.|||.||||||||||.||.||.||..||.||||||||||...|||||||
RBAM_027730__ 551 CCGATTTTTCAAATGTTGCGGAAGAGGAGCATGCGTACCGCATCTACAGA 600
BSNT_04470___ 601 AAAAGCGCCCTGATTACCGGCCCGATTTCACTGTTGTTTGCAGTATGCAT 650
...|||.|..|.||.||.||.|||.|.||.||..|.||.||..|.|.|||
RBAM_027730__ 601 CGGAGCTCTTTAATAACAGGGCCGCTGTCGCTTCTTTTCGCCTTCTTCAT 650
BSNT_04470___ 651 TATGGTGACAATGCGGAATGAAGCAAACTGGCTGTACAGCGGAATGATGA 700
||||.|||||.|.||...||||||...|||||||||.|..||.|||||||
RBAM_027730__ 651 TATGCTGACATTACGTTCTGAAGCCGGCTGGCTGTATACGGGGATGATGA 700
BSNT_04470___ 701 ATGATTTTACTTGGATTATTGCATCGTTCATCACATTTGTCATTGCTGGA 750
|.||....||.|||.|.|||...||..||||.||||||.|||||||.||.
RBAM_027730__ 701 AAGACAAGACATGGCTCATTCTGTCTGTCATTACATTTATCATTGCCGGC 750
BSNT_04470___ 751 ATCGCTCTTTTTCTGCCTAACAAAAGCTTTGGGCAAAACATCGGAAAACC 800
...|||||.|||.||||.||.||..||||.||.|..|||.||||.|||||
RBAM_027730__ 751 GCGGCTCTGTTTTTGCCGAATAAGCGCTTCGGCCGCAACCTCGGCAAACC 800
BSNT_04470___ 801 GCGTCTCGCACTTG-TTGCGATTGGGATACAGTATTTTCTCGCAAGCTAC 849
|.|..|||| |.|| |.||.||||.|.|.||.||.|||||.||||||||.
RBAM_027730__ 801 GAGAATCGC-CATGATCGCCATTGCGCTTCAATACTTTCTGGCAAGCTAT 849
BSNT_04470___ 850 GCGTACGGGCGGGCGCATCTTCCGTATATGATTTATCCCGATGTGACAGT 899
||.|||||.||||||||||||||.||||||||||||||.|||.|.||.||
RBAM_027730__ 850 GCATACGGACGGGCGCATCTTCCTTATATGATTTATCCGGATATTACGGT 899
BSNT_04470___ 900 CATGTCAGGCTTCACAGAGCCAGCAACGTTCAGAGCGCTGTTTGCAACGT 949
|||||||||.||.||.|||||.||.||.|||||.|||||||||...||||
RBAM_027730__ 900 CATGTCAGGATTTACGGAGCCGGCCACCTTCAGGGCGCTGTTTATGACGT 949
BSNT_04470___ 950 ATATCGTTGCATTTATCATTCTATTTCCGGGCTTCTTTTTCTTCTGGAAA 999
|||||||.||.||.||.|||.|.|||||.||.||.|.||||||||||||.
RBAM_027730__ 950 ATATCGTCGCTTTCATTATTTTGTTTCCCGGGTTTTATTTCTTCTGGAAG 999
BSNT_04470___ 1000 ATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAG 1041
.|.||||||..|||.|.|||.||||||||||||||||||||.
RBAM_027730__ 1000 CTCTTTATGAAAGACAGACGTTATATCCGCCAGGAGGAATAA 1041
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