Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04470 and RBAM_027730

See Amino acid alignment / Visit BSNT_04470 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:58
# Commandline: needle
#    -asequence dna-align/BSNT_04470___ythB.1.9828.seq
#    -bsequence dna-align/RBAM_027730___ythB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04470___ythB-RBAM_027730___ythB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04470___ythB-RBAM_027730___ythB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04470___ythB
# 2: RBAM_027730___ythB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1042
# Identity:     785/1042 (75.3%)
# Similarity:   785/1042 (75.3%)
# Gaps:           2/1042 ( 0.2%)
# Score: 2885.0
# 
#
#=======================================

BSNT_04470___      1 ATGGAGATTTCAACTGACGCTCTGATCGCCATCTCAATTATCTGGGGCTT     50
                     |||||.|||.|.|..||.|||||.||.||.||.|||||..|.||||||||
RBAM_027730__      1 ATGGACATTACCATGGATGCTCTCATTGCGATATCAATCGTATGGGGCTT     50

BSNT_04470___     51 TGTGTTTATTTACGCCGTCATGGCGACAATGGATTTTGGAGCGGGATTTT    100
                     .||||||||.|||||.||||||||.||.|||||.||.|||||.||.||||
RBAM_027730__     51 CGTGTTTATCTACGCGGTCATGGCAACGATGGACTTCGGAGCCGGCTTTT    100

BSNT_04470___    101 GGTCTATGATCTATTTAAACAAGGAGCATATGAAGGCCACCGATATTGCG    150
                     ||||.|||||.||||||||.||.||.||.|..|||||.||..|.||.||.
RBAM_027730__    101 GGTCGATGATTTATTTAAATAAAGAACAAACAAAGGCGACAAACATCGCC    150

BSNT_04470___    151 AATCGCTTTTTGTCCCCGACTTGGGAGGTCACAAACGTCTTTATTGTGGC    200
                     ||.||.|.||||||||||||.|||||.||.||.|||||||||||.||.||
RBAM_027730__    151 AACCGTTATTTGTCCCCGACATGGGAAGTGACCAACGTCTTTATCGTCGC    200

BSNT_04470___    201 CATCGTCGTGGCGCTTTTCAGTTTTTTCCCCGGCGCGACATTTGTGCTCG    250
                     .|||||.||.||.||.|||||.||.||.||.||.||.||.||.|||||.|
RBAM_027730__    201 AATCGTTGTCGCCCTATTCAGCTTCTTTCCAGGGGCAACCTTCGTGCTGG    250

BSNT_04470___    251 GCACCGTTTTATTAATTCCCGGAAGCATGATTTTACTGCTTTTAGCGATT    300
                     |.|||||||||||.||.||.||.||.||.|||||.|||||||||||.||.
RBAM_027730__    251 GAACCGTTTTATTGATCCCGGGGAGTATTATTTTGCTGCTTTTAGCCATC    300

BSNT_04470___    301 CGAAGCGGATTTCTCGTGTTTTCAAATACAGCAAAGGAGCGGAAAACGCT    350
                     ||.|||||.||||||||.||.||.|||||.||.|||||..|.||||...|
RBAM_027730__    301 CGCAGCGGCTTTCTCGTTTTCTCCAATACGGCGAAGGAAAGAAAAATCAT    350

BSNT_04470___    351 AAGATATATTTCCGGCATCTCCGGCTTTATCATTCCTGCTATTTTAATTT    400
                     .||||||||.|||||.||.||.|||||.||.|||||.|||.|..|.||||
RBAM_027730__    351 GAGATATATCTCCGGAATTTCGGGCTTCATTATTCCCGCTGTGCTGATTT    400

BSNT_04470___    401 TGGTGCTTCCTGTGACACACGGAGGGTTTATAGAAAAAACGGATGGAATC    450
                     ||||.|||||.||.|||||||||||.|||||.||.||.||||..||..|.
RBAM_027730__    401 TGGTCCTTCCGGTCACACACGGAGGATTTATTGAGAAGACGGGCGGCGTG    450

BSNT_04470___    451 TATAACTTAAATATGTCTAAAATCTTTTCAAGCCCCAACGCCTATTCATT    500
                     |||.||.|.|||.||.|.||..|||||.||||||..||.||.|||.|.||
RBAM_027730__    451 TATCACCTGAATTTGGCAAATGTCTTTACAAGCCTTAATGCGTATGCGTT    500

BSNT_04470___    501 TATCGGGTTTGCGATTTTAAGCACCTTATTTTTGTCCTCGCTGCTGCTTG    550
                     ||||||.|||||.|||||||||||.||||||||.||.||.|||||.||.|
RBAM_027730__    501 TATCGGCTTTGCCATTTTAAGCACTTTATTTTTATCTTCACTGCTTCTGG    550

BSNT_04470___    551 CAGATGTTTCAAATGTGGCAGAGGAACAGGATGCGTACCGAGCCTACAGA    600
                     |.|||.||||||||||.||.||.||..||.||||||||||...|||||||
RBAM_027730__    551 CCGATTTTTCAAATGTTGCGGAAGAGGAGCATGCGTACCGCATCTACAGA    600

BSNT_04470___    601 AAAAGCGCCCTGATTACCGGCCCGATTTCACTGTTGTTTGCAGTATGCAT    650
                     ...|||.|..|.||.||.||.|||.|.||.||..|.||.||..|.|.|||
RBAM_027730__    601 CGGAGCTCTTTAATAACAGGGCCGCTGTCGCTTCTTTTCGCCTTCTTCAT    650

BSNT_04470___    651 TATGGTGACAATGCGGAATGAAGCAAACTGGCTGTACAGCGGAATGATGA    700
                     ||||.|||||.|.||...||||||...|||||||||.|..||.|||||||
RBAM_027730__    651 TATGCTGACATTACGTTCTGAAGCCGGCTGGCTGTATACGGGGATGATGA    700

BSNT_04470___    701 ATGATTTTACTTGGATTATTGCATCGTTCATCACATTTGTCATTGCTGGA    750
                     |.||....||.|||.|.|||...||..||||.||||||.|||||||.||.
RBAM_027730__    701 AAGACAAGACATGGCTCATTCTGTCTGTCATTACATTTATCATTGCCGGC    750

BSNT_04470___    751 ATCGCTCTTTTTCTGCCTAACAAAAGCTTTGGGCAAAACATCGGAAAACC    800
                     ...|||||.|||.||||.||.||..||||.||.|..|||.||||.|||||
RBAM_027730__    751 GCGGCTCTGTTTTTGCCGAATAAGCGCTTCGGCCGCAACCTCGGCAAACC    800

BSNT_04470___    801 GCGTCTCGCACTTG-TTGCGATTGGGATACAGTATTTTCTCGCAAGCTAC    849
                     |.|..|||| |.|| |.||.||||.|.|.||.||.|||||.||||||||.
RBAM_027730__    801 GAGAATCGC-CATGATCGCCATTGCGCTTCAATACTTTCTGGCAAGCTAT    849

BSNT_04470___    850 GCGTACGGGCGGGCGCATCTTCCGTATATGATTTATCCCGATGTGACAGT    899
                     ||.|||||.||||||||||||||.||||||||||||||.|||.|.||.||
RBAM_027730__    850 GCATACGGACGGGCGCATCTTCCTTATATGATTTATCCGGATATTACGGT    899

BSNT_04470___    900 CATGTCAGGCTTCACAGAGCCAGCAACGTTCAGAGCGCTGTTTGCAACGT    949
                     |||||||||.||.||.|||||.||.||.|||||.|||||||||...||||
RBAM_027730__    900 CATGTCAGGATTTACGGAGCCGGCCACCTTCAGGGCGCTGTTTATGACGT    949

BSNT_04470___    950 ATATCGTTGCATTTATCATTCTATTTCCGGGCTTCTTTTTCTTCTGGAAA    999
                     |||||||.||.||.||.|||.|.|||||.||.||.|.||||||||||||.
RBAM_027730__    950 ATATCGTCGCTTTCATTATTTTGTTTCCCGGGTTTTATTTCTTCTGGAAG    999

BSNT_04470___   1000 ATGTTTATGCGAGATAAACGCTATATCCGCCAGGAGGAATAG   1041
                     .|.||||||..|||.|.|||.||||||||||||||||||||.
RBAM_027730__   1000 CTCTTTATGAAAGACAGACGTTATATCCGCCAGGAGGAATAA   1041


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