Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04466 and RBAM_027690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04466___ytjA.1.9828.seq
# -bsequence dna-align/RBAM_027690___ytjA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04466___ytjA-RBAM_027690___ytjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04466___ytjA-RBAM_027690___ytjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04466___ytjA
# 2: RBAM_027690___ytjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity: 185/228 (81.1%)
# Similarity: 185/228 (81.1%)
# Gaps: 0/228 ( 0.0%)
# Score: 753.0
#
#
#=======================================
BSNT_04466___ 1 ATGAAAACCCTATTCATCGCTCTGATCAGAGGATATCAAAAATTCATCTC 50
|||||||||.||.|.||.|||.|.|||.|.|||||.||.||.||||||||
RBAM_027690__ 1 ATGAAAACCATAATGATTGCTTTCATCCGCGGATACCAGAAGTTCATCTC 50
BSNT_04466___ 51 GCCCCTGACACCGCCAACGTGCCGCTTTTATCCGACCTGTTCCCAATATG 100
.||.|||||.|||||..|.|||||||||||||||||.|||||.||.||.|
RBAM_027690__ 51 TCCGCTGACGCCGCCGTCATGCCGCTTTTATCCGACGTGTTCGCAGTACG 100
BSNT_04466___ 101 GAATCGAAGCGATTAAAACACATGGCGCTTTAAAAGGCGGATGGCTGACA 150
||||||||||..|.||.||.||.|||||.|||||||||||||||||||||
RBAM_027690__ 101 GAATCGAAGCCGTCAAGACTCACGGCGCATTAAAAGGCGGATGGCTGACA 150
BSNT_04466___ 151 ATCAAACGGATTTTGAAATGCCACCCGTTCCATCCGGGAGGAGTCGATCC 200
.|.||.||||||||.||.||||||||.||.||||||||.||.||.|||||
RBAM_027690__ 151 CTGAAGCGGATTTTAAAGTGCCACCCTTTTCATCCGGGCGGTGTTGATCC 200
BSNT_04466___ 201 CGTTCCTGAAAAGAAACAAAAACATTAA 228
|||.||.||.||.||||||||||||||.
RBAM_027690__ 201 CGTACCGGACAAAAAACAAAAACATTAG 228
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