Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04461 and RBAM_027660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:58
# Commandline: needle
# -asequence dna-align/BSNT_04461___dps.1.9828.seq
# -bsequence dna-align/RBAM_027660___dps.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04461___dps-RBAM_027660___dps.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04461___dps-RBAM_027660___dps.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04461___dps
# 2: RBAM_027660___dps
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 440
# Identity: 354/440 (80.5%)
# Similarity: 354/440 (80.5%)
# Gaps: 4/440 ( 0.9%)
# Score: 1402.0
#
#
#=======================================
BSNT_04461___ 1 ATGTCAGAACAATTGATT-CAAGCAGTGAACAAACAAGTAGCCAACTGGA 49
|||||||||.||.| ||| .|.|||||.||.||.|||||.||.|||||||
RBAM_027660__ 1 ATGTCAGAAAAACT-ATTGGACGCAGTCAATAAGCAAGTTGCAAACTGGA 49
BSNT_04461___ 50 CAGTCATGTATGTGAAACTACATAATTATCACTGGTATGTGAAAGGGAAA 99
|.|||||||||||||||.|||||||.|||||.|||||.||.||||||||.
RBAM_027660__ 50 CGGTCATGTATGTGAAATTACATAACTATCATTGGTACGTCAAAGGGAAG 99
BSNT_04461___ 100 GATTTCTTCACTCTTCATGAAAAGTTTGAGGAGCTGTACAACGAAACGGC 149
||.||.|||||..|.|||||||||||.|||||||||||.|||||||||||
RBAM_027660__ 100 GACTTTTTCACATTGCATGAAAAGTTCGAGGAGCTGTATAACGAAACGGC 149
BSNT_04461___ 150 AACTTATATTGATGACTTAGCAGAACGTCTTTTGGCGCTGAACGGAAAAC 199
.||.|||||||||||..|.|||||||||||..||||..|.|||||.||.|
RBAM_027660__ 150 TACATATATTGATGATCTGGCAGAACGTCTGCTGGCATTAAACGGCAAGC 199
BSNT_04461___ 200 CGATTGCAACAATGAAGGAATCCTTAGAA-ACGGCTTCTGTCAAAGAAGC 248
||||.|..|||||||.||||||.|| ||| |..||.|||||.||||||||
RBAM_027660__ 200 CGATCGGCACAATGACGGAATCATT-GAAGATCGCGTCTGTAAAAGAAGC 248
BSNT_04461___ 249 TGCTGGAAATGAAACAGCTGAACAAATGGTTCAAAGCGTATATGATGATT 298
.|..||.|||||.|..||.|||||||||||.||.|.|.|.||||||||||
RBAM_027660__ 249 GGAAGGCAATGAGAGCGCAGAACAAATGGTACAGAACATTTATGATGATT 298
BSNT_04461___ 299 TCACAGTCATCGCGGAAGAGCTGAAAAACGGCATGGATTTAGCTGATGAA 348
||||.|||||.||||||||||||||||.||||||||||.|.||.|||||.
RBAM_027660__ 299 TCACTGTCATTGCGGAAGAGCTGAAAAGCGGCATGGATCTCGCAGATGAG 348
BSNT_04461___ 349 GTCGGTGACGAAACAACAGGGGACATGCTTCTTGCGATCCATCAAAATAT 398
||.||.||||||||.||.||.||.|||||.|||||.||.||.||.|||||
RBAM_027660__ 349 GTAGGAGACGAAACGACCGGTGATATGCTGCTTGCCATTCACCAGAATAT 398
BSNT_04461___ 399 TGAAAAACATAACTGGATGCTAAAAGCTTACCTAGGTTAA 438
.||||||||||||||||||||.|||||.||..|.||.|||
RBAM_027660__ 399 CGAAAAACATAACTGGATGCTGAAAGCGTATTTGGGATAA 438
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