Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04448 and RBAM_027570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04448___metK.1.9828.seq
# -bsequence dna-align/RBAM_027570___metK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04448___metK-RBAM_027570___metK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04448___metK-RBAM_027570___metK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04448___metK
# 2: RBAM_027570___metK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1204
# Identity: 1025/1204 (85.1%)
# Similarity: 1025/1204 (85.1%)
# Gaps: 2/1204 ( 0.2%)
# Score: 4397.0
#
#
#=======================================
BSNT_04448___ 1 ATGAGTAAAAATCGTCGTTTATTTACATCAGAATCTGTTACGGAGGGGCA 50
|||||||||||.|||||..||||||||||.|||||||||||.|||||.||
RBAM_027570__ 1 ATGAGTAAAAACCGTCGACTATTTACATCTGAATCTGTTACTGAGGGTCA 50
BSNT_04448___ 51 TCCGGATAAAATCTGTGACCAGATTTCTGACAGCATTTTAGATGAAATTT 100
||||||.||||||||||||||.|||||||||||.||.||||||||.||||
RBAM_027570__ 51 TCCGGACAAAATCTGTGACCAAATTTCTGACAGTATCTTAGATGAGATTT 100
BSNT_04448___ 101 TAAAGAAAGACCCTAACGCGCGTGTTGCTTGTGAAACATCTGTGACAACA 150
||||.||.|||||.||||||||.||.||.||.|||||||||||.||.|||
RBAM_027570__ 101 TAAAAAATGACCCGAACGCGCGCGTGGCCTGCGAAACATCTGTAACGACA 150
BSNT_04448___ 151 GGTTTGGTTCTTGTAAGCGGAGAGATCACAACTTCTACGTATGTTGACAT 200
||..|.||.||.||||||||||||||.||.||.||.||.||.||||||||
RBAM_027570__ 151 GGACTTGTGCTGGTAAGCGGAGAGATTACGACATCAACATACGTTGACAT 200
BSNT_04448___ 201 TCCGAAAACGGTTCGCCAAACCATTAAAGAAATCGGATACACACGTGCAA 250
|||||||||.||.||..||||.||||||||||||||.||||||||.||.|
RBAM_027570__ 201 TCCGAAAACAGTCCGTGAAACGATTAAAGAAATCGGCTACACACGCGCCA 250
BSNT_04448___ 251 AATACGGATTTGATGCGGAAACTTGTGCGGTTTTAACATCAATTGATGAG 300
||||.||||||||||||||.|||||.||.||||||||||||||||||||.
RBAM_027570__ 251 AATATGGATTTGATGCGGAGACTTGCGCTGTTTTAACATCAATTGATGAA 300
BSNT_04448___ 301 CAGTCTGCTGATATCGCGATGGGCGTAGACCAAGCGCTTGAAGCCCGTGA 350
||||||||.||||||||.|||||.||.||.||.||.||||||||.|||||
RBAM_027570__ 301 CAGTCTGCGGATATCGCAATGGGTGTCGATCAGGCTCTTGAAGCGCGTGA 350
BSNT_04448___ 351 AGGCACAATGAGCGACGAAGAAATTGAAGCGATTGGTGCGGGTGACCAAG 400
|||||||||||||||.|..|||||.|||||.||.||.|||||.|||||||
RBAM_027570__ 351 AGGCACAATGAGCGATGCTGAAATCGAAGCAATCGGAGCGGGAGACCAAG 400
BSNT_04448___ 401 GATTAATGTTCGGTTATGCGTGCAACGAAACGAAAGAGCTTATGCCTCTT 450
|..|.|||||||||||||||||.|||||||||||||||||||||||.|||
RBAM_027570__ 401 GCCTGATGTTCGGTTATGCGTGTAACGAAACGAAAGAGCTTATGCCGCTT 450
BSNT_04448___ 451 CCAATTTCACTTGCCCATAAATTAGCCCGCCGCCTAAGTGAAGTCCGTAA 500
||.||.||..|.||.|||||||||||||||||..|.||.||||||||.||
RBAM_027570__ 451 CCGATCTCTTTGGCGCATAAATTAGCCCGCCGTTTGAGCGAAGTCCGCAA 500
BSNT_04448___ 501 AGAAGATATTCTTCCGTACCTTCGCCCTGACGGCAAAACACAGGTAACGG 550
||||||.||||||||||||||||||||||||||||||||.||.||.||.|
RBAM_027570__ 501 AGAAGACATTCTTCCGTACCTTCGCCCTGACGGCAAAACGCAAGTTACCG 550
BSNT_04448___ 551 TTGAGTACGATGAAAATAACAAACCAGTCCGCATTGACGCGATTGTTATT 600
||||.||.||||||||.|||||.||.||||||||.||||||||.||.|||
RBAM_027570__ 551 TTGAATATGATGAAAACAACAAGCCGGTCCGCATCGACGCGATCGTCATT 600
BSNT_04448___ 601 TCAACTCAGCATCATCCTGAAATTACACTTGAGCAAATTCAGCGCAACAT 650
|||||||||||.||.||.||||||||.||||||||.|||||||||||..|
RBAM_027570__ 601 TCAACTCAGCACCACCCGGAAATTACGCTTGAGCAGATTCAGCGCAATCT 650
BSNT_04448___ 651 TAAAGAACATGTAATCAATCCGGTTGTTCCTGAAGAGCTGATTGATGAAG 700
.|||||.|||||.||.||.||.||.||.|||||.||.|||||.|||||||
RBAM_027570__ 651 GAAAGAGCATGTCATTAACCCTGTCGTGCCTGAGGAACTGATCGATGAAG 700
BSNT_04448___ 701 AAACAAAATATTTCATCAACCCTACAGGACGTTTCGTAATCGGAGGCCCT 750
||||||||||.||||||||||||||.|||||||||||||||||.||.|||
RBAM_027570__ 701 AAACAAAATACTTCATCAACCCTACGGGACGTTTCGTAATCGGCGGACCT 750
BSNT_04448___ 751 CAAGGGGATGCGGGACTTACAGGACGCAAAATCATCGTTGATACGTACGG 800
|||||.||||||||.||.||.||.||.||||||||||||||.||.|||||
RBAM_027570__ 751 CAAGGTGATGCGGGTCTGACCGGCCGTAAAATCATCGTTGACACATACGG 800
BSNT_04448___ 801 CGGCTATGCACGCCACGGCGGAGGCGCGTTCTCAGGTAAGGACGCGACGA 850
|||.|||||||||||||||||.|||||.|||||.||||||||.|||||||
RBAM_027570__ 801 CGGATATGCACGCCACGGCGGCGGCGCATTCTCCGGTAAGGATGCGACGA 850
BSNT_04448___ 851 AGGTAGACCGTTCTGCAGCTTATGCGGCAAGATACGTTGCGAAAAACATC 900
||||||||||||||||.||.||.||.||.||||||||.||||||||||||
RBAM_027570__ 851 AGGTAGACCGTTCTGCGGCATACGCTGCGAGATACGTAGCGAAAAACATC 900
BSNT_04448___ 901 GTTGCGGCTGAGCTTGCTGATTCTTGCGAAGTACAGCTTGCTTACGCGAT 950
||.||.||.|..||||||||||||||.|||||.||||||||.|||||.||
RBAM_027570__ 901 GTGGCAGCAGGTCTTGCTGATTCTTGTGAAGTGCAGCTTGCATACGCAAT 950
BSNT_04448___ 951 CGGTGTTGCACAGCCTGTGTCAATCTCAATCAACACATTCGGTTCAGGAA 1000
|||.||.|||||||||||.||.||.||.|||||.|||||.|.|.||||||
RBAM_027570__ 951 CGGCGTGGCACAGCCTGTTTCTATTTCCATCAATACATTTGATACAGGAA 1000
BSNT_04448___ 1001 AAGCTTCTGAGGAAAAACTGATTGAAGTTGTTCGCAATAACTTTGATTTA 1050
||||||||||.|||||||||||.|||||.||.||.||||||||.||..|.
RBAM_027570__ 1001 AAGCTTCTGAAGAAAAACTGATCGAAGTCGTACGGAATAACTTCGACCTG 1050
BSNT_04448___ 1051 CGACCTGCCGGCATTATCAAAATGCTTGATTTGCGCCGTCCGATCTATAA 1100
.||||||||||||||||.||||||||||||||||||||.|||||||||||
RBAM_027570__ 1051 AGACCTGCCGGCATTATTAAAATGCTTGATTTGCGCCGCCCGATCTATAA 1100
BSNT_04448___ 1101 ACAAACTGCTGCGTACGGCCACTTTGGACGTCACGATGTTGACCTTCCAT 1150
.||.||.|||||.|||||||||||.||||||||.|||||.||.|||||.|
RBAM_027570__ 1101 GCAGACAGCTGCTTACGGCCACTTCGGACGTCATGATGTGGATCTTCCTT 1150
BSNT_04448___ 1151 GGGAGCGCACAGACAAAGCGGA-GCAGCTGCGTAAAGAAGCGTTAGGAGA 1199
|||||||.||.|||||.||||| || |||.||.||||||||..|||||||
RBAM_027570__ 1151 GGGAGCGTACTGACAAGGCGGATGC-GCTTCGCAAAGAAGCACTAGGAGA 1199
BSNT_04448___ 1200 ATAA 1203
||||
RBAM_027570__ 1200 ATAA 1203
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