Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04447 and RBAM_027560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:57
# Commandline: needle
# -asequence dna-align/BSNT_04447___asnB.1.9828.seq
# -bsequence dna-align/RBAM_027560___asnB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04447___asnB-RBAM_027560___asnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04447___asnB-RBAM_027560___asnB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04447___asnB
# 2: RBAM_027560___asnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1912
# Identity: 1605/1912 (83.9%)
# Similarity: 1605/1912 (83.9%)
# Gaps: 26/1912 ( 1.4%)
# Score: 6802.5
#
#
#=======================================
BSNT_04447___ 1 ATGTGTGGATTTGTCGGGGTTTTTAACAAGCATCCGTTAGCTCAAACCGC 50
|||||||||||||||||.||||||||.||||||||.|||.||||||||||
RBAM_027560__ 1 ATGTGTGGATTTGTCGGTGTTTTTAATAAGCATCCATTAACTCAAACCGC 50
BSNT_04447___ 51 TGATCAAGAAGAACTAATCAAACAAATGAACCAAATGATCGTTCACCGCG 100
.|||||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_027560__ 51 AGATCAAGAAGAGCTAATCAAACAAATGAACCAAATGATCGTTCACCGCG 100
BSNT_04447___ 101 GTCCTGACAGTGATGGATATTTCCATGATGAGCACGTCGGCTTCGGATTC 150
||||||||||.|||||.||||..|||||.|||||||||||.|||||.|||
RBAM_027560__ 101 GTCCTGACAGCGATGGGTATTATCATGACGAGCACGTCGGATTCGGCTTC 150
BSNT_04447___ 151 AGACGGCTCAGCATTATTGATGTAGAAAATGGCGGACAGCCTTTATCATA 200
|||||||||||.||||||||.||||||||.||||||||||||||||||||
RBAM_027560__ 151 AGACGGCTCAGTATTATTGACGTAGAAAACGGCGGACAGCCTTTATCATA 200
BSNT_04447___ 201 TGAAGATGAAACATATTGGATTATCTTTAACGGAGAAATCTATAACTATA 250
||||||.||||.|||||||||.||.||||||||.||||||||||||||.|
RBAM_027560__ 201 TGAAGACGAAAAATATTGGATCATTTTTAACGGCGAAATCTATAACTACA 250
BSNT_04447___ 251 TCGAACTGAGAGAAGAACTTGAAGCAAAGGGGTACACATTCAACACGGAT 300
|.|||.||||||||||.||||||||.||.||.|||||.|||||.||.|||
RBAM_027560__ 251 TTGAATTGAGAGAAGAGCTTGAAGCCAAAGGCTACACTTTCAATACAGAT 300
BSNT_04447___ 301 TCGGACACAGAGGTTCTTCTTGCGACTTACCGTCACTATAAAGAAGAAGC 350
||.||.||.||.||.||.||||||||.||||||||.||||||||||||||
RBAM_027560__ 301 TCCGATACCGAAGTGCTCCTTGCGACATACCGTCATTATAAAGAAGAAGC 350
BSNT_04447___ 351 GGCGTCCAAACTGCGCGGTATGTTTGCCTTTCTGATTTGGAATAAAAACG 400
.||.||.||.||.|||||.||||||||.|||.|.||.|||||.|||...|
RBAM_027560__ 351 TGCTTCAAAGCTTCGCGGAATGTTTGCGTTTTTAATCTGGAACAAAGCTG 400
BSNT_04447___ 401 A-----TCATGTGCTTTATGGGGCAAGAGATCCATTCGGCATTAAACCGT 445
| ||||| ||.||.||.|||||.||.|||||||||||||||.
RBAM_027560__ 401 ACCGCGTCATG-----TACGGCGCGAGAGACCCGTTCGGCATTAAACCGC 445
BSNT_04447___ 446 TGTATTACACAACGATCAATGATCAGGTTTATTTTGCCTCAGAGAGAAAA 495
|||||||||||||.|||...||..|.||.||||||||.||.||.||||||
RBAM_027560__ 446 TGTATTACACAACCATCGGGGACAAAGTATATTTTGCATCTGAAAGAAAA 495
BSNT_04447___ 496 AGTTTAATGGTTGCTCAGAATGATATTGAAATAGATAAAGAGGCATTGCA 545
||||||||||..|||||.||.|..|||||..|.||||.||...|.||.||
RBAM_027560__ 496 AGTTTAATGGCCGCTCAAAACGGCATTGATCTTGATACAGCTTCTTTACA 545
BSNT_04447___ 546 GCAGTACATGTCTTTCCAATTTGTTCCTGAACCAAGCACGCTTGATGCCC 595
|||.||.||||||||||||||.|||||||||||.|||||||||||.||..
RBAM_027560__ 546 GCAATATATGTCTTTCCAATTCGTTCCTGAACCGAGCACGCTTGACGCTG 595
BSNT_04447___ 596 ATGTGAAAAAAGTAGAGCCGGGTTCA--CAGTTCACAATCCGCCCGGACG 643
|.|||||||||||.|||||||| || |||||.||.|||||||||||.|
RBAM_027560__ 596 AAGTGAAAAAAGTCGAGCCGGG--CAGCCAGTTTACGATCCGCCCGGAAG 643
BSNT_04447___ 644 GCGATATCACATTCAAAACGTATTTCAAAGCGAACTTCAAGCCGGTTCAG 693
||||||||.|.||.|||||.|||||||||||||||||.|||||.||||||
RBAM_027560__ 644 GCGATATCGCGTTTAAAACATATTTCAAAGCGAACTTTAAGCCTGTTCAG 693
BSNT_04447___ 694 ACTGAAGAAGACAAGCTTGTGAAAGAAGTCCGAGACGCGATCTATGACTC 743
.||||.|||||.||..|.||||||||||||.|||||||.||||.||||||
RBAM_027560__ 694 TCTGATGAAGATAAATTGGTGAAAGAAGTCAGAGACGCAATCTTTGACTC 743
BSNT_04447___ 744 TGTAAACGTTCATATGAGAAGTGACGTTCCTGTCGGTTCGTTCCTGTCTG 793
|||.||.|||||.||||||||||||||.||||||||||||||.||.||.|
RBAM_027560__ 744 TGTCAAAGTTCACATGAGAAGTGACGTGCCTGTCGGTTCGTTTCTATCCG 793
BSNT_04447___ 794 GCGGGATTGATTCTTCCTTTATTGTGTCTGTTGCGAAGGAATTTCATCCA 843
||||.||.||.|||||.|||||.||.||.||||||||.||||||||.||.
RBAM_027560__ 794 GCGGTATCGACTCTTCTTTTATCGTCTCAGTTGCGAAAGAATTTCACCCG 843
BSNT_04447___ 844 AGCTTAAAAACATTCTCTGTCGGCTTTGAACAGCAGGGCTTCAGTGAGGT 893
|||.|.||||||||.||.|||||.|||||.||||||||||||||||||||
RBAM_027560__ 844 AGCCTTAAAACATTTTCCGTCGGTTTTGAGCAGCAGGGCTTCAGTGAGGT 893
BSNT_04447___ 894 TGATGTAGCGAAAGAAACGGCAGCGGCGCTGGGCATTGAAAATATCAGCA 943
|||.||||||||.||||||||.||.|||||.||.||||||||.|||||||
RBAM_027560__ 894 TGACGTAGCGAAGGAAACGGCTGCCGCGCTCGGGATTGAAAACATCAGCA 943
BSNT_04447___ 944 AAGTCATTTCGCCTGAGGAATACATGAATGAGCTTCCGAAGATCGTTTGG 993
||||||||||.||||||||.||.|||||.|||||||||||.|||||.|||
RBAM_027560__ 944 AAGTCATTTCTCCTGAGGAGTATATGAACGAGCTTCCGAAAATCGTCTGG 993
BSNT_04447___ 994 CATTTTGATGACCCGCTTGCTGATCCGGCAGCGATTCCGTTGTACTTTGT 1043
||.|||||||||||||||||.||||||||.||||||||.|||||||||||
RBAM_027560__ 994 CACTTTGATGACCCGCTTGCAGATCCGGCGGCGATTCCTTTGTACTTTGT 1043
BSNT_04447___ 1044 TGCAAAAGAAGCGAAAAAACATGTTACGGTTGCTTTATCAGGTGAAGGAG 1093
.||.||||||||||||||||||||.|||||.||.|||||.||.|||||.|
RBAM_027560__ 1044 CGCGAAAGAAGCGAAAAAACATGTAACGGTCGCGTTATCCGGGGAAGGCG 1093
BSNT_04447___ 1094 CGGATGAGCTCTTCGGCGGATATAACATTTACCGTGAACCGCTTTCGCTT 1143
||||.|||||.||||||||.||.||.||||||||.|||||||||||||||
RBAM_027560__ 1094 CGGACGAGCTGTTCGGCGGGTACAATATTTACCGCGAACCGCTTTCGCTT 1143
BSNT_04447___ 1144 AAACCGTTTGAACGGATTCCGTCCGGCTTGAAAAAGATGCTTCTGCACGT 1193
||||||||||||||.|||||||||||..|||||||.||||||||.||.||
RBAM_027560__ 1144 AAACCGTTTGAACGCATTCCGTCCGGTCTGAAAAAAATGCTTCTTCATGT 1193
BSNT_04447___ 1194 TGCTGCCGTTATGCCTGAAGGTATGAGAGGAAAGAGCCTGCTTGAG--CG 1241
.||..||||.|||||||||||.||||||||.||.||||| ||| || ||
RBAM_027560__ 1194 GGCGTCCGTCATGCCTGAAGGAATGAGAGGGAAAAGCCT-CTT-AGTCCG 1241
BSNT_04447___ 1242 CGGCTGTACTCCGCTTCAGGATCGTTATATCGGTAACGCGAAAATCTTTG 1291
||||||.||.||||||.||||.||.|||||||||||.|||||.||.||||
RBAM_027560__ 1242 CGGCTGCACACCGCTTGAGGAGCGCTATATCGGTAATGCGAAGATTTTTG 1291
BSNT_04447___ 1292 AAGAGTCTGTCAAAAAGCAGCTGTTGAAGCATTATAATCCGAACCTTTCA 1341
|||||.|.||.||||||||||||.|.||.|||||.|||||..|.||||||
RBAM_027560__ 1292 AAGAGCCCGTGAAAAAGCAGCTGCTCAAACATTACAATCCAGAGCTTTCA 1341
BSNT_04447___ 1342 TATCGCGATGTGACGAAGACTTACTTTACAGAAAGCAGCTCGTACAGCGA 1391
||.||.|||||.||||||.|.||||||||.||||||.|.||.||||||||
RBAM_027560__ 1342 TACCGTGATGTCACGAAGCCGTACTTTACGGAAAGCCGTTCATACAGCGA 1391
BSNT_04447___ 1392 TATCAACAAAATGCAGTATGTCGATATCCACACTTGGATGCGCGGCGACA 1441
.||.||.||||||||||||||.||.|||||.||.||||||||||||||||
RBAM_027560__ 1392 CATTAATAAAATGCAGTATGTTGACATCCATACGTGGATGCGCGGCGACA 1441
BSNT_04447___ 1442 TTTTGTTAAAGGCGGATAAAATGACGATGGCGAATTCTTTGGAACTGCGT 1491
|..||||||||||.||.||||||||||||||.||.||.|||||||||||.
RBAM_027560__ 1442 TCCTGTTAAAGGCTGACAAAATGACGATGGCCAACTCATTGGAACTGCGC 1491
BSNT_04447___ 1492 GTGCCGTTCTTGGATAAAGTCGTATTCGACGTCGCTTCAAAAATTCCTGA 1541
|||||||||.|.||||||||.||.||.|||||.|||||.||||||||.||
RBAM_027560__ 1492 GTGCCGTTCCTTGATAAAGTTGTGTTTGACGTGGCTTCTAAAATTCCGGA 1541
BSNT_04447___ 1542 TGAGCTGAAAACGAAGAACGGCACGACGAAGTATCTTCTTCGCAAAGCCG 1591
|||.|||||||||||.||||||||||||||.||.|||||.||||||||.|
RBAM_027560__ 1542 TGAACTGAAAACGAAAAACGGCACGACGAAATACCTTCTGCGCAAAGCTG 1591
BSNT_04447___ 1592 CTGAAGGAATTGTGCCTGAGCACGTATTAAACCGCAAAAAGCTTGGTTTC 1641
|||||||..|.||||||||.||.||..|.||||||||||||||.||.|||
RBAM_027560__ 1592 CTGAAGGGGTAGTGCCTGATCATGTGCTTAACCGCAAAAAGCTCGGCTTC 1641
BSNT_04447___ 1642 CCTGTACCGATCCGTCATTGGCTGAAAAACGAAATGAACGAATGGGTGCG 1691
|||||.||||||||.||.|||||||||||.|||||||||||||||||.||
RBAM_027560__ 1642 CCTGTGCCGATCCGCCACTGGCTGAAAAATGAAATGAACGAATGGGTTCG 1691
BSNT_04447___ 1692 GAATATTATTCAAGAAAGCCAAACGGATGCTTATATCCATAAGGATTATG 1741
.||.||.||||..|||||..||||.|||||||||||..|.||||||||||
RBAM_027560__ 1692 CAACATCATTCGTGAAAGTGAAACAGATGCTTATATTGAAAAGGATTATG 1741
BSNT_04447___ 1742 TCCTTCAGCTTCTTGAAGACCATTGTGCGGACAAGGCTGATAACAGCCGT 1791
|||||||||||||.|||||.||||||||.||||..||.||.||||||||.
RBAM_027560__ 1742 TCCTTCAGCTTCTGGAAGATCATTGTGCCGACAGAGCGGACAACAGCCGC 1791
BSNT_04447___ 1792 AAAATTTGGACTGTGCTAATCTTTATGATCTGGCACAGCATCAATATTGA 1841
|||||.|||||.|||||.|||||||||||||||||||||||||||.||||
RBAM_027560__ 1792 AAAATCTGGACCGTGCTGATCTTTATGATCTGGCACAGCATCAATGTTGA 1841
BSNT_04447___ 1842 AAAACGGTATA----TGCCTGAAGAGCTGAGCCATCAGCCTAAAGAAGTC 1887
|||| |.| ||||.||||||||||..||||||||.|||||||||
RBAM_027560__ 1842 AAAA----AGACTGGTGCCGGAAGAGCTGAATCATCAGCCGAAAGAAGTC 1887
BSNT_04447___ 1888 ATCTTTGTGTAA 1899
||.||.||.|||
RBAM_027560__ 1888 ATTTTCGTTTAA 1899
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