Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04445 and RBAM_027540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:55
# Commandline: needle
# -asequence dna-align/BSNT_04445___ytoA.1.9828.seq
# -bsequence dna-align/RBAM_027540___ytoA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04445___ytoA-RBAM_027540___ytoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04445___ytoA-RBAM_027540___ytoA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04445___ytoA
# 2: RBAM_027540___ytoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity: 396/528 (75.0%)
# Similarity: 396/528 (75.0%)
# Gaps: 21/528 ( 4.0%)
# Score: 1489.0
#
#
#=======================================
BSNT_04445___ 1 ---ATGATCTACCCTTATAAGGAACACAA-----GCCAGATATCCACCCA 42
||.|||||||||||||| |||| |||.||.||.||.||.
RBAM_027540__ 1 ATGATAATCTACCCTTATAA-----ACAATTTACGCCTGACATACATCCT 45
BSNT_04445___ 43 ACAGCCTTTATAGCTGATAATGCAACAATTACCGGTGATGTCGTGATCGG 92
..|||.||.||.||.|||||.||....|||||.||.||.|||||||||||
RBAM_027540__ 46 GAAGCGTTCATTGCGGATAACGCCGTCATTACGGGCGACGTCGTGATCGG 95
BSNT_04445___ 93 AGAACAGTCCAGCATTTGGTTTTCTGTTGTCATAAGGGGAGATGTTGCGC 142
||||||.||.|||||||||||.||.|..|||||..||||.||||||||||
RBAM_027540__ 96 AGAACAATCAAGCATTTGGTTCTCAGCCGTCATCCGGGGGGATGTTGCGC 145
BSNT_04445___ 143 CGACCAGAATCGGAAACAGAGTCAATATCCAAGATTTAAGCTGCCTCCAT 192
||||.||.||||||||.|||||||..||.|||||.||.|||||.||.|||
RBAM_027540__ 146 CGACAAGGATCGGAAAAAGAGTCAGCATACAAGACTTGAGCTGTCTGCAT 195
BSNT_04445___ 193 CAAAGCCCGAACAAGACGCTGCTCATTGAAGATGACGCCACGATAGGCCA 242
|||||.||||||....||||.||.|||||||||||||.||||||.|||||
RBAM_027540__ 196 CAAAGTCCGAACCGCCCGCTTCTTATTGAAGATGACGTCACGATCGGCCA 245
BSNT_04445___ 243 TCAGGTTACACTTCATAGCGCTGTTATCCGCAAGAACGCCTTAATCGGGA 292
||||||||||||.||.|||||..|.|||...|||||.||.||||||||.|
RBAM_027540__ 246 TCAGGTTACACTGCACAGCGCAATCATCAAAAAGAATGCTTTAATCGGTA 295
BSNT_04445___ 293 TGGGCTCAATCATTTTAGACGGAGCCGAAATTGGCGAAGGCGCTTTTATT 342
|||||||..|||||.|.|||||.||.|||||.||.||||||||.|||||.
RBAM_027540__ 296 TGGGCTCCGTCATTCTGGACGGGGCGGAAATCGGAGAAGGCGCGTTTATC 345
BSNT_04445___ 343 GGTGCCGGCAGTCTTGTCCCGCCCGGAAAAATCATTCCGCCTGACCATCT 392
||.|||||.|||||.||.||.||.||.||||.||||||.||.|.|..|||
RBAM_027540__ 346 GGCGCCGGAAGTCTCGTTCCTCCGGGCAAAACCATTCCTCCCGGCTGTCT 395
BSNT_04445___ 393 CGCCTTTGGCCGCCCTGCAAAAGTCATCCGCCCTTTGACGGAAGAAGACC 442
.||.||.|||||.||.|||||.||.|||||||...||||.|||||||||.
RBAM_027540__ 396 TGCGTTCGGCCGGCCCGCAAAGGTTATCCGCCGGCTGACAGAAGAAGACA 445
BSNT_04445___ 443 GAAAAGATATGCAAAGAAT----ACGGTCAGAATATGTAGAAAAGGGCCA 488
.|...||.|||.||||||| ||| ||||||||.|||||.||||.
RBAM_027540__ 446 TACGGGACATGGAAAGAATCAGAACG----GAATATGTTGAAAAAGGCCG 491
BSNT_04445___ 489 ATATTATAAATTTCTTCAACAAACATAA 516
|||.||||||...||.|||.|.|.||||
RBAM_027540__ 492 ATACTATAAAACACTGCAAGAGAAATAA 519
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