Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04429 and RBAM_027330

See Amino acid alignment / Visit BSNT_04429 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:54
# Commandline: needle
#    -asequence dna-align/BSNT_04429___ytsA.1.9828.seq
#    -bsequence dna-align/RBAM_027330___bceR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04429___ytsA-RBAM_027330___bceR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04429___ytsA-RBAM_027330___bceR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04429___ytsA
# 2: RBAM_027330___bceR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 715
# Identity:     534/715 (74.7%)
# Similarity:   534/715 (74.7%)
# Gaps:          38/715 ( 5.3%)
# Score: 1984.0
# 
#
#=======================================

BSNT_04429___      1 TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAAT     50
                     .|||||.|..|||||.|.||.|||||||||.|..|..||||||||||.||
RBAM_027330__      1 ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTGTTTCATGAGAT     50

BSNT_04429___     51 CAAGGATCGTTTAACGGGATGGTCCTATGATGTATACGGCATTCAGGATT    100
                     .||.||..|.||||||||.|||||.|.||..||..||||.||..|.||||
RBAM_027330__     51 GAAAGAGAGATTAACGGGCTGGTCATTTGCGGTGCACGGAATAAAAGATT    100

BSNT_04429___    101 TCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATT    150
                     ||||.|.|||..|.|.|||.|||.|.|...|.||.|||||||..||.||.
RBAM_027330__    101 TCAGCCGGGTCATCCGGGAGTTTACCGAAATCAAGCCTGATTTGGTGATC    150

BSNT_04429___    151 ATTGATGTACAGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGAT    200
                     |||||||||||||||||.||||||||||||||||||||||||.|...|||
RBAM_027330__    151 ATTGATGTACAGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGAT    200

BSNT_04429___    201 CCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCCCGGGATCATC    250
                     .|||||||..|||||.||.||||||||||||||.|||||.||.|||||||
RBAM_027330__    201 ACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCGCGCGATCATC    250

BSNT_04429___    251 CTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAA    300
                     |.||.||||||||.|||||.||||||||||||||||||||.|||||.||.
RBAM_027330__    251 CCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAG    300

BSNT_04429___    301 AAGCCATTTCATTTTGATGTGCTGATCGCGAAAATCCAAGCGATGTTCCG    350
                     |||||.|||||.|||||||||.|.|||||||||||.||.|||.|||||||
RBAM_027330__    301 AAGCCTTTTCACTTTGATGTGTTAATCGCGAAAATACAGGCGGTGTTCCG    350

BSNT_04429___    351 GCGTGTGCACCATTATAATACGGAGCCGAATAC-------GATTAAAACG    393
                     .||||||||.|     |||||||..|.||  ||       |||.||||..
RBAM_027330__    351 CCGTGTGCATC-----AATACGGCACAGA--ACCGGCGCTGATGAAAAGA    393

BSNT_04429___    394 TGGTGCGGCGCTGCTGTAGACGCGGAGCAGAACC----TCGTCAGCAATG    439
                     ||||||||.||.|...|.|||.|.||    ||||    ..||||||..|.
RBAM_027330__    394 TGGTGCGGAGCGGTCATTGACACAGA----AACCAACACGGTCAGCCGTA    439

BSNT_04429___    440 ACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATTCTAAAACAA    489
                     |.||.||.||.||.||.|||||||||||.||||||.|.||..||||||..
RBAM_027330__    440 AAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATCTTAAAACTG    489

BSNT_04429___    490 TTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAG    539
                     .|....|||||.|||||.||.|||||||||||||||||.||.||||||||
RBAM_027330__    490 CTGGCTGAGCAGAAAAATAAAATCGTCAGCCGGGAAGAACTCATCAGAAG    539

BSNT_04429___    540 CTTGTGGAACGATGAGCGTTTTGTTAGTGATAATACGCTGACCGTCAATG    589
                     |.|.|||||.|||||||||||.||.|||||||||||||||||.||.||||
RBAM_027330__    540 CCTATGGAATGATGAGCGTTTCGTCAGTGATAATACGCTGACGGTGAATG    589

BSNT_04429___    590 TCAATCGCCTGCGAAAAAAACTGGACGCCCTGCA-----GCTTGGCGCAT    634
                     ||||.||.|||||.||||||||.||      .||     ||.|.|.|.|.
RBAM_027330__    590 TCAACCGGCTGCGGAAAAAACTCGA------ACAATTAGGCATCGGGAAA    633

BSNT_04429___    635 AT-ATCGAGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAA    683
                     || ||.||.||.||||||||.|||||.||||||||.||||||||.|||  
RBAM_027330__    634 ATGATTGAAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGAC--    681

BSNT_04429___    684 GTTC--TATGATTAA    696
                     |.||  |||||||||
RBAM_027330__    682 GGTCTTTATGATTAA    696


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