Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04429 and RBAM_027330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:54
# Commandline: needle
# -asequence dna-align/BSNT_04429___ytsA.1.9828.seq
# -bsequence dna-align/RBAM_027330___bceR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04429___ytsA-RBAM_027330___bceR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04429___ytsA-RBAM_027330___bceR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04429___ytsA
# 2: RBAM_027330___bceR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 715
# Identity: 534/715 (74.7%)
# Similarity: 534/715 (74.7%)
# Gaps: 38/715 ( 5.3%)
# Score: 1984.0
#
#
#=======================================
BSNT_04429___ 1 TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAAT 50
.|||||.|..|||||.|.||.|||||||||.|..|..||||||||||.||
RBAM_027330__ 1 ATGTTTCACATTTTGTTAATAGAAGATGATAACACTTTGTTTCATGAGAT 50
BSNT_04429___ 51 CAAGGATCGTTTAACGGGATGGTCCTATGATGTATACGGCATTCAGGATT 100
.||.||..|.||||||||.|||||.|.||..||..||||.||..|.||||
RBAM_027330__ 51 GAAAGAGAGATTAACGGGCTGGTCATTTGCGGTGCACGGAATAAAAGATT 100
BSNT_04429___ 101 TCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATT 150
||||.|.|||..|.|.|||.|||.|.|...|.||.|||||||..||.||.
RBAM_027330__ 101 TCAGCCGGGTCATCCGGGAGTTTACCGAAATCAAGCCTGATTTGGTGATC 150
BSNT_04429___ 151 ATTGATGTACAGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGAT 200
|||||||||||||||||.||||||||||||||||||||||||.|...|||
RBAM_027330__ 151 ATTGATGTACAGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGAT 200
BSNT_04429___ 201 CCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCCCGGGATCATC 250
.|||||||..|||||.||.||||||||||||||.|||||.||.|||||||
RBAM_027330__ 201 ACGCTCCCAATCAAACGTGCCGATTCTCTTTTTGTCCTCGCGCGATCATC 250
BSNT_04429___ 251 CTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAA 300
|.||.||||||||.|||||.||||||||||||||||||||.|||||.||.
RBAM_027330__ 251 CCGCGGATATGGTCATGTCGATGCAGCTCGGGGCAGATGATTTTATTCAG 300
BSNT_04429___ 301 AAGCCATTTCATTTTGATGTGCTGATCGCGAAAATCCAAGCGATGTTCCG 350
|||||.|||||.|||||||||.|.|||||||||||.||.|||.|||||||
RBAM_027330__ 301 AAGCCTTTTCACTTTGATGTGTTAATCGCGAAAATACAGGCGGTGTTCCG 350
BSNT_04429___ 351 GCGTGTGCACCATTATAATACGGAGCCGAATAC-------GATTAAAACG 393
.||||||||.| |||||||..|.|| || |||.||||..
RBAM_027330__ 351 CCGTGTGCATC-----AATACGGCACAGA--ACCGGCGCTGATGAAAAGA 393
BSNT_04429___ 394 TGGTGCGGCGCTGCTGTAGACGCGGAGCAGAACC----TCGTCAGCAATG 439
||||||||.||.|...|.|||.|.|| |||| ..||||||..|.
RBAM_027330__ 394 TGGTGCGGAGCGGTCATTGACACAGA----AACCAACACGGTCAGCCGTA 439
BSNT_04429___ 440 ACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATTCTAAAACAA 489
|.||.||.||.||.||.|||||||||||.||||||.|.||..||||||..
RBAM_027330__ 440 AAAACGGTTCGGTCGAGCTGACCAAAAACGAAATGCTGATCTTAAAACTG 489
BSNT_04429___ 490 TTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAG 539
.|....|||||.|||||.||.|||||||||||||||||.||.||||||||
RBAM_027330__ 490 CTGGCTGAGCAGAAAAATAAAATCGTCAGCCGGGAAGAACTCATCAGAAG 539
BSNT_04429___ 540 CTTGTGGAACGATGAGCGTTTTGTTAGTGATAATACGCTGACCGTCAATG 589
|.|.|||||.|||||||||||.||.|||||||||||||||||.||.||||
RBAM_027330__ 540 CCTATGGAATGATGAGCGTTTCGTCAGTGATAATACGCTGACGGTGAATG 589
BSNT_04429___ 590 TCAATCGCCTGCGAAAAAAACTGGACGCCCTGCA-----GCTTGGCGCAT 634
||||.||.|||||.||||||||.|| .|| ||.|.|.|.|.
RBAM_027330__ 590 TCAACCGGCTGCGGAAAAAACTCGA------ACAATTAGGCATCGGGAAA 633
BSNT_04429___ 635 AT-ATCGAGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAA 683
|| ||.||.||.||||||||.|||||.||||||||.||||||||.|||
RBAM_027330__ 634 ATGATTGAAACCAAGGTGGGGCAGGGATACATCGCAAAGGAAGAAGAC-- 681
BSNT_04429___ 684 GTTC--TATGATTAA 696
|.|| |||||||||
RBAM_027330__ 682 GGTCTTTATGATTAA 696
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