Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04413 and RBAM_027240

See Amino acid alignment / Visit BSNT_04413 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:53
# Commandline: needle
#    -asequence dna-align/BSNT_04413.1.9828.seq
#    -bsequence dna-align/RBAM_027240___ytwF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04413-RBAM_027240___ytwF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04413-RBAM_027240___ytwF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04413
# 2: RBAM_027240___ytwF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 312
# Identity:     244/312 (78.2%)
# Similarity:   244/312 (78.2%)
# Gaps:           0/312 ( 0.0%)
# Score: 948.0
# 
#
#=======================================

BSNT_04413         1 TTGGAAATAAAAGAAATCAGCACAGCCGCTTTGAAAGAAAAAATTGAGGC     50
                     |||.|||||||.|||||||||||||||||..||.||||||||.|..|.||
RBAM_027240__      1 TTGAAAATAAATGAAATCAGCACAGCCGCACTGGAAGAAAAATTAAAAGC     50

BSNT_04413        51 GGACGAAGAATTATATTTAATTGATGTCAGAGAAGATGAAGAGGTAGCGG    100
                     ||..|||||..|.|||.|.|||||||||||||||||.|||||.||.||.|
RBAM_027240__     51 GGGAGAAGAGCTGTATCTGATTGATGTCAGAGAAGACGAAGAAGTTGCCG    100

BSNT_04413       101 AAGGCATGATCCCGCAAGCCGTTCATATTCGCATGGGGGATATTCCTGAA    150
                     ||||.|||||.|||.|.||||||||.||.|||||||||||.||.|||||.
RBAM_027240__    101 AAGGAATGATTCCGGAGGCCGTTCACATCCGCATGGGGGACATCCCTGAG    150

BSNT_04413       151 AAAATGGAAACCCTTGATAAAGACAAAGAGTACGTATTTATCTGCCGCTC    200
                     ||.|||||..|..|.||.||.|||||.||.||.||||||||||||||.||
RBAM_027240__    151 AAGATGGATGCGTTAGACAAGGACAAGGAATATGTATTTATCTGCCGTTC    200

BSNT_04413       201 AGGAATGCGCAGCATGAACGTCTGCAAGTACCTGGATGAGCAAGGCTTTA    250
                     .||||...|.|||||||||||.||.|.|||..|..|||||||.|||||..
RBAM_027240__    201 CGGAAAAAGAAGCATGAACGTTTGTATGTATTTACATGAGCAGGGCTTCC    250

BSNT_04413       251 AAACAGTCAATGTTGAAGGCGGCATGATGGCATGGGAAGGCGAAACAAAA    300
                     ..||.||.||||||||||||||||||.|||..|||||||||||||||||.
RBAM_027240__    251 GTACGGTTAATGTTGAAGGCGGCATGCTGGAGTGGGAAGGCGAAACAAAG    300

BSNT_04413       301 CCAAAAAACTAG    312
                     ||.||.||.||.
RBAM_027240__    301 CCGAAGAAATAA    312


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