Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04373 and RBAM_027120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:51
# Commandline: needle
# -asequence dna-align/BSNT_04373.1.9828.seq
# -bsequence dna-align/RBAM_027120___ytzE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04373-RBAM_027120___ytzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04373-RBAM_027120___ytzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04373
# 2: RBAM_027120___ytzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 156/222 (70.3%)
# Similarity: 156/222 (70.3%)
# Gaps: 48/222 (21.6%)
# Score: 708.0
#
#
#=======================================
BSNT_04373 1 ------------------------------------------------AT 2
||
RBAM_027120__ 1 TTGAAACCTTCAACAAATCGTATGCTGACTCGGATTAAATCAGTTTACAT 50
BSNT_04373 3 GTTTATCCAAGAAAAAGGTCTTGTGACAACACAGGAACTGGTTGACGAAT 52
|||.|||||.||||||||.||||||||||||||||||||||||||.||||
RBAM_027120__ 51 GTTCATCCAGGAAAAAGGCCTTGTGACAACACAGGAACTGGTTGATGAAT 100
BSNT_04373 53 TCGGCATTACACCTAGAACGATTCAAAGAGACTTAAATGTGTTGGCATAT 102
|||||||||||||||||||.|||||..||||||||||||||||.|||||.
RBAM_027120__ 101 TCGGCATTACACCTAGAACCATTCAGCGAGACTTAAATGTGTTAGCATAC 150
BSNT_04373 103 AATGATCTTGTTCATAGTCCAAGCCGTGGCAAGTGGGAGACAACGAGAAA 152
||||||||||||||||||||.|||||.|||||||||||||||||..||||
RBAM_027120__ 151 AATGATCTTGTTCATAGTCCTAGCCGAGGCAAGTGGGAGACAACACGAAA 200
BSNT_04373 153 GAAAGTAAAGATTACCTCATAA 174
.|||||.||.|||||.||.|||
RBAM_027120__ 201 AAAAGTGAAAATTACATCTTAA 222
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