Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04360 and RBAM_027020

See Amino acid alignment / Visit BSNT_04360 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence dna-align/BSNT_04360___ytzH.1.9828.seq
#    -bsequence dna-align/RBAM_027020___ytzH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04360___ytzH-RBAM_027020___ytzH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04360___ytzH-RBAM_027020___ytzH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04360___ytzH
# 2: RBAM_027020___ytzH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 284
# Identity:     221/284 (77.8%)
# Similarity:   221/284 (77.8%)
# Gaps:          10/284 ( 3.5%)
# Score: 869.0
# 
#
#=======================================

BSNT_04360___      1 ATGGGTTTA-----CATTATGAGCATCAAGTTCATTTATTGAAGGATATA     45
                     |||||.|||     |     ||.|||||.||.|..|||||.|||||.|||
RBAM_027020__      1 ATGGGCTTAACAAGC-----GAACATCAGGTCCGGTTATTAAAGGACATA     45

BSNT_04360___     46 TTGACTGACCATCAATTGGACTGCTGCGGAACAGTCGCAGAGTACGAGCA     95
                     .||.|..|||||||||||||.||||||||.||.||.||.|||||.||.||
RBAM_027020__     46 CTGGCCAACCATCAATTGGATTGCTGCGGCACGGTTGCCGAGTATGAACA     95

BSNT_04360___     96 GCTTGAGCGTGTGATTAAATCACTGATGGCAAACACCGAGCTTGATTCAA    145
                     |||.|||||.||.||.||||||||||||||.|||||||.|||||||||||
RBAM_027020__     96 GCTGGAGCGCGTCATCAAATCACTGATGGCCAACACCGGGCTTGATTCAA    145

BSNT_04360___    146 ATTTCAAAAACGTGCTTGAAGATGTTTACCGCTACAGCCAATCAGGAATA    195
                     ||.|.|||||||||||.||.|||||.||||||||||||||.||.||.||.
RBAM_027020__    146 ATATAAAAAACGTGCTCGAGGATGTCTACCGCTACAGCCAGTCCGGCATC    195

BSNT_04360___    196 TCGTCCAAATCCATCGACTCACACATACAAGAGCATCAGAACAGCCTGTC    245
                     .||.||.|.|||||||||.|.||.||.||.|||||.||.|||....||||
RBAM_027020__    196 ACGGCCGATTCCATCGACACGCATATTCAGGAGCACCAAAACCATTTGTC    245

BSNT_04360___    246 TCAATGGGTAGAGCAAATGGATTCGTATTCCTGA    279
                     .||||||||.|||||.|||||||||||.||||||
RBAM_027020__    246 CCAATGGGTGGAGCAGATGGATTCGTACTCCTGA    279


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.