Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04358 and RBAM_027010
See
Amino acid alignment /
Visit
BSNT_04358 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04358___trmB.1.9828.seq
# -bsequence dna-align/RBAM_027010___trmB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04358___trmB-RBAM_027010___trmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04358___trmB-RBAM_027010___trmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04358___trmB
# 2: RBAM_027010___trmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 514/659 (78.0%)
# Similarity: 514/659 (78.0%)
# Gaps: 22/659 ( 3.3%)
# Score: 2016.0
#
#
#=======================================
BSNT_04358___ 1 ATGAGAATGCGCCACAAGCCTTGGGCTGATGACTTTTTGGCTGAAAACGC 50
||||||||||||||.||.||||||||..||||.|||.||||.||||||||
RBAM_027010__ 1 ATGAGAATGCGCCATAAACCTTGGGCGAATGATTTTCTGGCAGAAAACGC 50
BSNT_04358___ 51 AGATATTTCCATCAGCAATCCTGCTGATTATAAAGGGAAATGGAACACAG 100
.||.||..|||||||..||||.||..|.|||||||||...||||||||.|
RBAM_027010__ 51 TGACATCGCCATCAGTGATCCGGCCCAGTATAAAGGGCGGTGGAACACGG 100
BSNT_04358___ 101 TGTTTGGCAACGACAATCCGATCCATATCGAGGTTGGTACAGGAAAAGGC 150
|.||||||||.|||||.|||||||||||.||.||.|||||.||||||||.
RBAM_027010__ 101 TCTTTGGCAATGACAACCCGATCCATATTGAAGTCGGTACGGGAAAAGGG 150
BSNT_04358___ 151 CAATTTATTTCTGGTATGGCCAAACAAAATCCCGACATCAATTATATTGG 200
||.||.|||||.||.||||||||.||.|||||.||.|||||.|||||.||
RBAM_027010__ 151 CAGTTCATTTCAGGAATGGCCAAGCAGAATCCGGATATCAACTATATCGG 200
BSNT_04358___ 201 TATTGAGTTATTTAAAAGCGTCATCGTGACAGCCGTCCAAAAAGTAAAAG 250
.||||||.|.|||||||||||||||||.||.|||||||||||||||||.|
RBAM_027010__ 201 GATTGAGCTGTTTAAAAGCGTCATCGTCACTGCCGTCCAAAAAGTAAAGG 250
BSNT_04358___ 251 ACAGCGAAGCGCAGAATGTAAAGCTTCTG---AATATAGATGCGGACACG 297
||||||..||.||.||||| .|.|.|| ||||||||.|||||.||.
RBAM_027010__ 251 ACAGCGGGGCTCACAATGT---CCGTTTGTTAAATATAGACGCGGAAACA 297
BSNT_04358___ 298 CTGACGGATGTGTTTGAGCCGGGGGAAGTGAAACGGGTCTACTTGAACTT 347
||||..||.||.|||||.|.|||.|||.|.||.||.||.||..|.|||||
RBAM_027010__ 298 CTGAATGACGTATTTGAACGGGGAGAAATCAAGCGCGTATATCTAAACTT 347
BSNT_04358___ 348 TTCTGATCCTTGGCCGAAGAAACGGCATGAAAAACGCCGCCTGACATATT 397
||||||.||.||||||||.||.||.||.|||||.|||||..|.|||| ||
RBAM_027010__ 348 TTCTGACCCGTGGCCGAAAAACCGCCACGAAAAGCGCCGTTTAACAT-TT 396
BSNT_04358___ 398 CCCAC-TTCCTCAAAAAATATGAAGAAGTAATGGGCAAAGGCGGATCGAT 446
...|| |||.|.||||||||.||||||||.||||||.||...||...|||
RBAM_027010__ 397 AAAACGTTCTTGAAAAAATACGAAGAAGTGATGGGCGAAACAGGTGAGAT 446
BSNT_04358___ 447 TCATTTTAAAACGGACAACCGAGGTTTGTTTGAGTACTCTTTGAAGAGCT 496
||||||||||||.||.|||||.|||||.||.||.||||||.||||.||||
RBAM_027010__ 447 TCATTTTAAAACCGATAACCGCGGTTTATTCGAATACTCTCTGAAAAGCT 496
BSNT_04358___ 497 TCTCTGAGTACGGCCTCCTGCTGACATACGTCAGCCTCGATTTGCATAAC 546
|.||.||.||||||||.||.|||||..|.||||||||.|||.||||.|||
RBAM_027010__ 497 TTTCCGAATACGGCCTGCTTCTGACGGAAGTCAGCCTTGATCTGCACAAC 546
BSNT_04358___ 547 AGCAATCTCGAA-GGCAATATTATGACAGAATATGAAGAAAAATTCTCTG 595
|||.||| |||| ||||||||||||||||||||.||||||||||||||.|
RBAM_027010__ 547 AGCGATC-CGAAGGGCAATATTATGACAGAATACGAAGAAAAATTCTCCG 595
BSNT_04358___ 596 CACTCGGCCAGCCGATCTATCGGGCTGAGGTTGAATGGAGAACGTAA--- 642
|.||||||||||||||.||.|||||.||.||||||||||||||..||
RBAM_027010__ 596 CGCTCGGCCAGCCGATTTACCGGGCCGAAGTTGAATGGAGAACAAAAGAC 645
BSNT_04358___ 642 --------- 642
RBAM_027010__ 646 AGACTCTGA 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.