Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04352 and RBAM_026980

See Amino acid alignment / Visit BSNT_04352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence dna-align/BSNT_04352___ytzB.1.9828.seq
#    -bsequence dna-align/RBAM_026980___ytzB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04352___ytzB-RBAM_026980___ytzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04352___ytzB-RBAM_026980___ytzB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04352___ytzB
# 2: RBAM_026980___ytzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     254/318 (79.9%)
# Similarity:   254/318 (79.9%)
# Gaps:           0/318 ( 0.0%)
# Score: 1014.0
# 
#
#=======================================

BSNT_04352___      1 TTGAAATTGCGTCATCTTCTTTTAGGAGCAGGACTTGGAATTTGTGCGGC     50
                     ||||||||.||||||.||||.|||||.||||||.|.|||.|.||.||.||
RBAM_026980__      1 TTGAAATTACGTCATTTTCTCTTAGGTGCAGGAGTCGGATTATGCGCTGC     50

BSNT_04352___     51 TGTCGTTGTGAAACAATATGTGATGAAGCCTTATATTTCTTCAGAAAAAG    100
                     ..|||..||||||.|.||||.||||||.||||||||.|||||||||||||
RBAM_026980__     51 CATCGCAGTGAAAAAGTATGCGATGAAACCTTATATCTCTTCAGAAAAAG    100

BSNT_04352___    101 CGCTTCGAATTGTAAAATCTGCTTTTAAGCAGCGGGGCCCGATTGACGGA    150
                     ||||.||.||.||.|||.|.||||||||.|||||.||.|||||.||||||
RBAM_026980__    101 CGCTCCGTATCGTGAAAGCGGCTTTTAAACAGCGCGGGCCGATAGACGGA    150

BSNT_04352___    151 TCATGGATTTACACCCAGCCGGAGCCTTACAATATTAACGGAGAAACGGT    200
                     ||||||||||||||..||||.|||||.|||.|..|.|||||||||||..|
RBAM_026980__    151 TCATGGATTTACACAGAGCCCGAGCCCTACCAGGTAAACGGAGAAACCAT    200

BSNT_04352___    201 ACAGGTATACAAAACCGGCATTACACGATCAGCTTTCGGAGAATTAGAAC    250
                     .|||||||||||.||||||.|.|||||.||.||.|||||.|||.|.||.|
RBAM_026980__    201 CCAGGTATACAAGACCGGCGTGACACGTTCGGCATTCGGCGAACTGGAGC    250

BSNT_04352___    251 AGTATGAAGTCATGGTGGATGCGAAAACGGGAGAAATTGTTGATGTCATT    300
                     |.||||||||.|||||..||||.|||||.||..|.|||||.|||||||||
RBAM_026980__    251 AATATGAAGTTATGGTCAATGCAAAAACAGGCCAGATTGTCGATGTCATT    300

BSNT_04352___    301 GATACAATCGCCTCTTAA    318
                     |||.|..|||||||.|||
RBAM_026980__    301 GATTCTGTCGCCTCATAA    318


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