Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04350 and RBAM_026970
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04350___ytoP.1.9828.seq
# -bsequence dna-align/RBAM_026970___ytoP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04350___ytoP-RBAM_026970___ytoP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04350___ytoP-RBAM_026970___ytoP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04350___ytoP
# 2: RBAM_026970___ytoP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1079
# Identity: 839/1079 (77.8%)
# Similarity: 839/1079 (77.8%)
# Gaps: 10/1079 ( 0.9%)
# Score: 3232.0
#
#
#=======================================
BSNT_04350___ 1 ATGAATCAAGAAACGAAAGCGCTTTTCCAAACACTGACGCAGCTTCCCGG 50
||||||.|.|||||||||.|||||||||..||.|||||||||||||||||
RBAM_026970__ 1 ATGAATGAGGAAACGAAAACGCTTTTCCGGACGCTGACGCAGCTTCCCGG 50
BSNT_04350___ 51 CGCGCCGGGCAATGAGCATCAGGTTCGTGCTTTTATGAAGCAGGAGCTAG 100
|||.|||||.|||||.||||||||.||..|.||||||||.|.||||||.|
RBAM_026970__ 51 CGCACCGGGAAATGAACATCAGGTCCGCTCCTTTATGAAACGGGAGCTTG 100
BSNT_04350___ 101 CCAAATATGCCGATGACATCGTTCAGGACAGACTGGGAAGTGTTTTCGGA 150
|.||||||||.|||||||||||.|||||||||||.|||||||||||||||
RBAM_026970__ 101 CGAAATATGCGGATGACATCGTGCAGGACAGACTCGGAAGTGTTTTCGGA 150
BSNT_04350___ 151 GTCAGACGAGGCGCAGAGGACGCACCGAGAATTATGGTAGCCGGGCACAT 200
||.||.||.|||||.||.||.||.||||...|||||||||||||.||.||
RBAM_026970__ 151 GTAAGGCGCGGCGCTGAAGATGCGCCGACCGTTATGGTAGCCGGCCATAT 200
BSNT_04350___ 201 GGACGAAGTCGGCTTCATGGTGACATCCATTACAGACAACGGGCTGCTCA 250
|||||||||.||.||.|||||.||....|||||.||.|||||..||||.|
RBAM_026970__ 201 GGACGAAGTGGGGTTTATGGTAACGCAGATTACGGATAACGGCATGCTGA 250
BSNT_04350___ 251 GATTCCAGACGCTCGGAGGCTGGTGGAGCCAGGTTTTGCTTGCGCAGCGG 300
||||.|||||||||||.|||||||||||.|||||..|||||||.|||||.
RBAM_026970__ 251 GATTTCAGACGCTCGGCGGCTGGTGGAGTCAGGTGCTGCTTGCCCAGCGC 300
BSNT_04350___ 301 GTTGAAATTCAAACAGATAACGGGCCGGTTCCGGGTGTGATTTCAAGCAT 350
||.||..|.||.||.||||||||.|||.||...||.||.||.||||||||
RBAM_026970__ 301 GTCGAGGTGCAGACGGATAACGGACCGATTATCGGCGTCATCTCAAGCAT 350
BSNT_04350___ 351 ACCGCCGCATTTATTGACAGATGCGCAGCG---AAACCGTCCGATGGATA 397
.|||||.||..|.||.||||||||.||||| ||| .||||||||.|
RBAM_026970__ 351 CCCGCCCCACATTTTAACAGATGCCCAGCGCGCAAA---GCCGATGGAGA 397
BSNT_04350___ 398 TCAAGAACATGATGATCGACATTGGAGCGGATGATAAGGAAGACGCCATC 447
||||.||.||||||||.||.||.||.||.|||||.|..||.|||||..||
RBAM_026970__ 398 TCAAAAATATGATGATTGATATCGGTGCCGATGACAGAGAGGACGCGGTC 447
BSNT_04350___ 448 AAAATCGGCATTAAACCGGGACAGCAGATCGTGCCTGTTTGTCCGTTTAC 497
|||||.||.||.|.|||||||||||||.||||||||||.||.|||||.||
RBAM_026970__ 448 AAAATGGGGATCAGACCGGGACAGCAGGTCGTGCCTGTCTGCCCGTTCAC 497
BSNT_04350___ 498 GACGATGGCGAATGAAAAGAAAATTTTATCAAAAGCATGGGATAACAGAT 547
..|||||||.||.||.||||||||.||.||.|||||.|||||||||.|.|
RBAM_026970__ 498 CCCGATGGCCAACGAGAAGAAAATATTGTCCAAAGCGTGGGATAACCGCT 547
BSNT_04350___ 548 ATGGATGCGGCTTAAGCATTGAACTTCTGAAGGAATTACACGGTAAAGAG 597
|.||.|||||.||||||||||||||..|.||.||..|.|||||.|||||.
RBAM_026970__ 548 ACGGCTGCGGGTTAAGCATTGAACTATTAAAAGAGCTGCACGGAAAAGAC 597
BSNT_04350___ 598 CTTCCGAATACACTCTATGCGGGTGCAACGGTTCAGGAAGAAGTAGGGCT 647
||.|||||.|..||.||.||.||.||.||.||||||||.|||||.||..|
RBAM_026970__ 598 CTGCCGAACAATCTGTACGCCGGGGCCACCGTTCAGGAGGAAGTCGGTTT 647
BSNT_04350___ 648 AAGGGGCGCGCAGACGGCTTCTCATATGATTAAACCGGACTTGTTTTTCG 697
.||.||.||||||||.||..|..|.||||||.|.||.||..|.|||||||
RBAM_026970__ 648 GAGAGGGGCGCAGACAGCGGCCAACATGATTCAGCCTGATCTCTTTTTCG 697
BSNT_04350___ 698 CCCTTGACGCCAGCCCGGCAAACGATATGAGCGGAGACAA--AAATGAAT 745
|.|||||.||||||||||||||.|||||||||||.||.|| |..|| |
RBAM_026970__ 698 CGCTTGATGCCAGCCCGGCAAATGATATGAGCGGCGATAAGGAGCTG--T 745
BSNT_04350___ 746 TCGGCCAGCTTGGAAAAGGCTTTTTGCTGCGCATTCTTGACAGAACGACA 795
||||||..||.||..|.||..|..||||.||||||||.|||||||||||.
RBAM_026970__ 746 TCGGCCGTCTCGGCGAGGGGGTGCTGCTCCGCATTCTCGACAGAACGACG 795
BSNT_04350___ 796 GTCATGCATCGCGGAATGAGGGAATTCGTTCTTGATATGGCTGAAACGCA 845
||||||||.|||||.|||||.||.|||||.|||||||||||.||||||||
RBAM_026970__ 796 GTCATGCACCGCGGGATGAGAGAGTTCGTCCTTGATATGGCGGAAACGCA 845
BSNT_04350___ 846 TGATATTCCATATCAATATTTTGTATCCGGCGGGGGAACAGACGCAGGCA 895
..||||.||.|||||||||||.|..||.|||||||||||.||.||.||..
RBAM_026970__ 846 CAATATCCCTTATCAATATTTCGCTTCAGGCGGGGGAACGGATGCCGGAC 895
BSNT_04350___ 896 AGGTTCATATTTCGAACAGCGGTGTGCCGTCAGCGGTTATCGGAATATGT 945
.|||.||.||.||.||||||||.||.|||||.||.||.|||||.||.|||
RBAM_026970__ 896 GGGTCCACATATCAAACAGCGGGGTTCCGTCTGCCGTCATCGGCATTTGT 945
BSNT_04350___ 946 TCCCGCTATATTCATACAAACGCTTCTATCATTCATATTGATGATTATGC 995
||..|.||.|||||||||||.||..|.|||||||||.|.|||||||||||
RBAM_026970__ 946 TCAAGATACATTCATACAAATGCCGCCATCATTCATGTCGATGATTATGC 995
BSNT_04350___ 996 TGCTGCTAAAGAAATGCTCATCAAACTTGTAACAGCCTGCGATAAGCAGA 1045
.||.||.||||||||||||||.||.||.||.|..||..|.||.||.||||
RBAM_026970__ 996 CGCGGCGAAAGAAATGCTCATTAAGCTGGTCATGGCGAGTGACAAACAGA 1045
BSNT_04350___ 1046 CGGTGGATGCGATTAAAGAAAATATGTAG 1074
||||.||..||||.|.|||||||.||||.
RBAM_026970__ 1046 CGGTCGAAACGATCAGAGAAAATGTGTAA 1074
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