Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04346 and RBAM_026950

See Amino acid alignment / Visit BSNT_04346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:48
# Commandline: needle
#    -asequence dna-align/BSNT_04346___ytpP.1.9828.seq
#    -bsequence dna-align/RBAM_026950___ytpP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04346___ytpP-RBAM_026950___ytpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04346___ytpP-RBAM_026950___ytpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04346___ytpP
# 2: RBAM_026950___ytpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     270/324 (83.3%)
# Similarity:   270/324 (83.3%)
# Gaps:           0/324 ( 0.0%)
# Score: 1134.0
# 
#
#=======================================

BSNT_04346___      1 ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGA     50
                     ||||||||.||||||...||..||||..||.|||||||||||.|.||.||
RBAM_026950__      1 ATGAAAAAGATTGAAAGCACGGAAGAATTGCAAAAAGCGGTACAAGACGA     50

BSNT_04346___     51 TTGGTCTGTATTTATGTTTTCAGCCGATTGGTGCCCGGATTGCCGTTTTG    100
                     ||||.|.|||||||||||||||||.||||||||||||||.|||||.||||
RBAM_026950__     51 TTGGGCGGTATTTATGTTTTCAGCGGATTGGTGCCCGGACTGCCGCTTTG    100

BSNT_04346___    101 TAGAGCCTTTCCTGCCTGAATTGGAAGCGAATTTCCCTGAATTCACCTAC    150
                     |.|||||.||.||.|||||..||||||||.|.||.|||||||||||.||.
RBAM_026950__    101 TGGAGCCGTTTCTCCCTGAGCTGGAAGCGGACTTTCCTGAATTCACTTAT    150

BSNT_04346___    151 TACTACGTAGACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAAT    200
                     ||||||||||||||.||..||||.|||||||||||.||.||.||||||||
RBAM_026950__    151 TACTACGTAGACCGCGATCAATTTATTGATACATGCGCGGAATGGGAAAT    200

BSNT_04346___    201 TTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAAGAAGTAAATC    250
                     ||||||.||.||.||||||||.||||||||.|.||||||||||||.||.|
RBAM_026950__    201 TTACGGCATTCCGAGCTTTGTTGTGTTTAACGGAGGAAAAGAAGTGAACC    250

BSNT_04346___    251 GTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTA    300
                     |.||.||.|||||||||||.||||||||||||||||||||.||.||||||
RBAM_026950__    251 GCTTCGTCAGCAAAGACCGTAAAACAAAAGAAGAAATTGAGCAATTTTTA    300

BSNT_04346___    301 ACAGACTCTCTCGCTAAAGCGTAA    324
                     ||.||.||.||.||||||||.|||
RBAM_026950__    301 ACCGATTCCCTTGCTAAAGCATAA    324


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