Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04340 and RBAM_026910
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04340___murC.1.9828.seq
# -bsequence dna-align/RBAM_026910___murC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04340___murC-RBAM_026910___murC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04340___murC-RBAM_026910___murC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04340___murC
# 2: RBAM_026910___murC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1311
# Identity: 1057/1311 (80.6%)
# Similarity: 1057/1311 (80.6%)
# Gaps: 24/1311 ( 1.8%)
# Score: 4258.0
#
#
#=======================================
BSNT_04340___ 1 ATGACTGTTTATCATTTTGTTGGAATAAAAGGGACCGGTATGAGTCCGCT 50
|||||||||||||||||||||||||||||||||||.||||||||.|||||
RBAM_026910__ 1 ATGACTGTTTATCATTTTGTTGGAATAAAAGGGACAGGTATGAGCCCGCT 50
BSNT_04340___ 51 TGCCCAAATACTTCATGATAATGGATATACTGTCCAAGGATCGGATATCG 100
|||.|||||.||.|||||||..||.|||...||.||.|||||||||||||
RBAM_026910__ 51 TGCTCAAATCCTGCATGATACAGGGTATCAGGTGCAGGGATCGGATATCG 100
BSNT_04340___ 101 AAAAATTTATTTTTACGCAAACAGCGCTTGAAAAAAGAAATATTACGATT 150
|.||....|||||.||.||..|.||.|||||||||||||||||..||| |
RBAM_026910__ 101 AGAAGCAGATTTTCACTCAGGCTGCCCTTGAAAAAAGAAATATCCCGA-T 149
BSNT_04340___ 151 CT-TCCTTTTAGCGCGGAAAATATTAAACCCGGCATGACAGTCATCGCCG 199
|| |||.||.|||||.||.||.||.|||||||||.|.||.||.|||||||
RBAM_026910__ 150 CTATCCGTTCAGCGCCGATAACATCAAACCCGGCTTAACGGTAATCGCCG 199
BSNT_04340___ 200 GAAACGCATTCCCAGACACGCATCCTGAAATAGAAAAAGCGATGTCTGAG 249
|||||||||||||.||..|.|||||.|||||.|.|||.|||.|..||||.
RBAM_026910__ 200 GAAACGCATTCCCTGATTCTCATCCGGAAATCGCAAAGGCGCTCGCTGAA 249
BSNT_04340___ 250 GGAATTCCGGTGATACGTTATCATAAGTTTTTAGGCGACTACATGAAAAA 299
||.|||||.||.||..|.||||||||.|||||||..||.||.||||||||
RBAM_026910__ 250 GGGATTCCTGTCATCAGATATCATAAATTTTTAGCTGAATATATGAAAAA 299
BSNT_04340___ 300 ATTCACGAGTGTTGCCGTTACGGGCGCACACGGCAAAACGTCGACTACGG 349
||.|||.|||||.||.||.|||||||||||||||||.|||||.||.||||
RBAM_026910__ 300 ATACACAAGTGTCGCGGTAACGGGCGCACACGGCAAGACGTCCACAACGG 349
BSNT_04340___ 350 GTCTGCTGGCTCACGTGATCCAAAACGCAAAACCGACGTC-TTTCTTAAT 398
|.||..||||.||||||||.||..|.||.||.|||||.|| |||||| ||
RBAM_026910__ 350 GCCTCTTGGCACACGTGATGCAGCAGGCGAAGCCGACTTCGTTTCTT-AT 398
BSNT_04340___ 399 CGGAGACGGAACAGGCCAG-GGAAATGAAAACAGCGAATACTTTGTGTTT 447
|||.|||||||| ||.||| ||||||||||.|||||||||||||||.|||
RBAM_026910__ 399 CGGGGACGGAAC-GGGCAGAGGAAATGAAAGCAGCGAATACTTTGTATTT 447
BSNT_04340___ 448 GAAGCGTGCGAATACCGCCGCCATTTCTTAAGCTATCAGCCAGATTATGC 497
|||||.|||||.||||||||.||||||||||||||||||||.||||||||
RBAM_026910__ 448 GAAGCCTGCGAGTACCGCCGTCATTTCTTAAGCTATCAGCCTGATTATGC 497
BSNT_04340___ 498 GATTATGACGAATATTGATTTTGATCATCCTGATTACTTCTCAAGCATTG 547
||||||||||||||||||||||||.||.||||||||.|||.|.|.|||||
RBAM_026910__ 498 GATTATGACGAATATTGATTTTGACCACCCTGATTATTTCGCCAACATTG 547
BSNT_04340___ 548 ACGATGTATTTGACGCTTTCCAAGAGATGGCTCTTCAGGTCAACAAAGGC 597
|||||||.|||||.|||||||||.|.|||||.|||||.||||||||||||
RBAM_026910__ 548 ACGATGTGTTTGATGCTTTCCAAAACATGGCGCTTCAAGTCAACAAAGGC 597
BSNT_04340___ 598 ATTATTGCCTGCGGAGACGATGAGCATCTGCCGAAAATCCATGCGAACGT 647
||.|||||||||||.||.||.|||.|.|||||||||||.||.||.||.||
RBAM_026910__ 598 ATCATTGCCTGCGGTGATGACGAGTACCTGCCGAAAATTCACGCCAATGT 647
BSNT_04340___ 648 CCCGGTTGTGTATTACGGCACGGGGGAAGAAAATGATTTTCAAGCCAGAA 697
.||.||.|||||||||||||||||.||||||||||||||||||||.||||
RBAM_026910__ 648 GCCTGTCGTGTATTACGGCACGGGAGAAGAAAATGATTTTCAAGCGAGAA 697
BSNT_04340___ 698 ACATCGTAAAAAGCACGGAAGGGACAACTTTTGATGTCTTTGTCCGCAAT 747
||||||||||||..||||||||.||.||.|||||.|||||||||||||||
RBAM_026910__ 698 ACATCGTAAAAAATACGGAAGGCACGACATTTGACGTCTTTGTCCGCAAT 747
BSNT_04340___ 748 ACGTTCTATGATACGTTTTATATTCCTGCGTACGGCCACCACAATGTATT 797
|||||.||.||||||||.||.||.||.||.||||||||.||||||||..|
RBAM_026910__ 748 ACGTTTTACGATACGTTCTACATCCCGGCATACGGCCATCACAATGTCCT 797
BSNT_04340___ 798 AAACTCATTGGCGGTCATTGCGTTATGCCATTATGAAGAAATTGATTCCA 847
.||.||.||.||||||||||||.|.|||||.||||||||.||.||....|
RBAM_026910__ 798 CAATTCCTTAGCGGTCATTGCGCTCTGCCACTATGAAGAGATAGACGTGA 847
BSNT_04340___ 848 GCATCATTAAGCATGCTCTCAAATCCTTTGGGGGCGTCAAACGCAGATTC 897
.|||.|||||||..|..||..||||.||.||.||||||||||||||||||
RBAM_026910__ 848 ACATGATTAAGCTCGGGCTTGAATCATTCGGCGGCGTCAAACGCAGATTC 897
BSNT_04340___ 898 AATGAGAA--------GCAGCTTGGGGATCAAGTGCTGATCGATGACTAT 939
|||||.|| ||||| ||.||.||||||||.|||||.
RBAM_026910__ 898 AATGAAAAAGTGATCGGCAGC--------CAGGTACTGATCGACGACTAC 939
BSNT_04340___ 940 GCCCATCATCCGACAGAAATAAAAGTGACAATCGAGGCGGCAAGACAGAA 989
|||||.||||||||.|||||.|||||.||.||.||||||||..|.||.||
RBAM_026910__ 940 GCCCACCATCCGACTGAAATCAAAGTCACGATTGAGGCGGCGCGCCAAAA 989
BSNT_04340___ 990 GTATCCTGATCGGGAAATTGTCGCGGTATTCCAGCCTCATACATTTACAC 1039
.|||||.||.||.|||||..||||||||||.|||||.|||||.|||||||
RBAM_026910__ 990 ATATCCCGAACGTGAAATCATCGCGGTATTTCAGCCGCATACGTTTACAC 1039
BSNT_04340___ 1040 GGACGC-AGCAGTTCCTTGACGAATTTGCAGAAAGCCTGAGCGGCGCTGA 1088
|||||| |.|| |||||.||.|||||.|||||||||.|.||||..||.||
RBAM_026910__ 1040 GGACGCAATCA-TTCCTGGATGAATTCGCAGAAAGCTTAAGCGCGGCCGA 1088
BSNT_04340___ 1089 CTGTGTGTATTTATGCGATATTTTCGGCTCAGCCCGTGAGAATGCCGGAA 1138
..|.||||||.|.|||||.|||||||||||.|||||.|||||.|.|||.|
RBAM_026910__ 1089 TCGCGTGTATCTGTGCGACATTTTCGGCTCTGCCCGCGAGAACGTCGGCA 1138
BSNT_04340___ 1139 AGCTGACGATCGGCGATCTCCAGGGAAAAATTCATAATGCCAAGCTGATT 1188
||||.||||||...|||||.||||.||||||....||.||..|.||.|||
RBAM_026910__ 1139 AGCTCACGATCACGGATCTTCAGGAAAAAATCGCCAACGCAGAACTCATT 1188
BSNT_04340___ 1189 GAAGAAGATGACACATCTGTTTTAAAAGCTCATGATAAAGCCGTTCTCAT 1238
||||||.||||||||||.||.||||||||.|||||....||.||.||.||
RBAM_026910__ 1189 GAAGAAAATGACACATCCGTGTTAAAAGCGCATGAAGGCGCAGTGCTGAT 1238
BSNT_04340___ 1239 CTTCATGGGAGCAGGAGATATCCAAAAATATATGAGAGCCTACGAAAACG 1288
|||||||||.||.|||||.||.||||||||||||||||||||.|||||||
RBAM_026910__ 1239 CTTCATGGGCGCCGGAGACATTCAAAAATATATGAGAGCCTATGAAAACG 1288
BSNT_04340___ 1289 TCATGGCATAA 1299
||||.||.|||
RBAM_026910__ 1289 TCATAGCGTAA 1299
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