Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04332 and RBAM_026870
See
Amino acid alignment /
Visit
BSNT_04332 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04332___aroA.1.9828.seq
# -bsequence dna-align/RBAM_026870___aroA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04332___aroA-RBAM_026870___aroA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04332___aroA-RBAM_026870___aroA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04332___aroA
# 2: RBAM_026870___aroA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1088
# Identity: 895/1088 (82.3%)
# Similarity: 895/1088 (82.3%)
# Gaps: 13/1088 ( 1.2%)
# Score: 3734.0
#
#
#=======================================
BSNT_04332___ 1 ATGAAAAAAATGAGCAACACAGAGTTAGAGCTTTTAAGGCAGAAAGCAGA 50
||||||||||..||.||||||....||||.|||.|.|||||
RBAM_026870__ 1 ---------ATGAGCAACAAGGAATTAGAGAGCCTAAGACAGCAGGCAGA 41
BSNT_04332___ 51 CGAATTAAACCTACAAATTTTAAAACTAATCAACGAACGCGGAAATGTTG 100
||.|.|||||.||.||||..|.|||.|||||||.|||||||||...||||
RBAM_026870__ 42 CGCACTAAACTTAGAAATCCTTAAATTAATCAATGAACGCGGAGCCGTTG 91
BSNT_04332___ 101 TAAAAGAGATCGGTAAAGCGAAGGAAGCACAGGGCGTCAACCGATTTGAC 150
|||||||.|||||||||||.||||||||||||||.|||||||||||||||
RBAM_026870__ 92 TAAAAGAAATCGGTAAAGCAAAGGAAGCACAGGGTGTCAACCGATTTGAC 141
BSNT_04332___ 151 CCTGTCAGAGAACGCACAATGTTAAACAATATCATTGAAAACAATGACGG 200
|||||||||||.||.||||||.|.|||...||.|||||||.|||||||||
RBAM_026870__ 142 CCTGTCAGAGAGCGTACAATGCTTAACCGCATTATTGAAAGCAATGACGG 191
BSNT_04332___ 201 GCCGTTCGAAAATTCAACCATCCAGCACATTTTTAAAGAGATATTCAAAG 250
.||.||.|||||.|||||.||||||||.|||||.|||||.||.|||||||
RBAM_026870__ 192 CCCATTTGAAAACTCAACGATCCAGCATATTTTCAAAGAAATTTTCAAAG 241
BSNT_04332___ 251 CCGGTTTAGAGCTTCAGGAAGAAGATCACAGCAAAGCGCTGCTTGTCTCC 300
||||..|.||.|||||.|||||.|||||||||||||||.||||.||||||
RBAM_026870__ 242 CCGGACTTGAACTTCAAGAAGAGGATCACAGCAAAGCGTTGCTCGTCTCC 291
BSNT_04332___ 301 CGCAAGAAAAAACCTGAAGATACAATTGTTGATATCAAAGGCGAAAAAAT 350
||.|||||||||.|.||||||||.||.||||||||.|||||.||||||||
RBAM_026870__ 292 CGGAAGAAAAAAGCAGAAGATACGATCGTTGATATTAAAGGTGAAAAAAT 341
BSNT_04332___ 351 CGGAGACGGCCAGCAAAGATTCATTGTCGGCCCATGTGCGGTAGAGAGCT 400
|||.||||||.|.||.||||||||.|||||.||.|||||.|||||.||||
RBAM_026870__ 342 CGGTGACGGCGATCAGAGATTCATCGTCGGACCTTGTGCCGTAGAAAGCT 391
BSNT_04332___ 401 ATGAGCAGGTAGCTGAAGTCGCTGCAGCTGCGAAAAAACAAGGGATTAAA 450
||||||||||.||.|||||.||.||.||.||||||||||||||.||||||
RBAM_026870__ 392 ATGAGCAGGTTGCCGAAGTAGCGGCCGCAGCGAAAAAACAAGGCATTAAA 441
BSNT_04332___ 451 ATTTTGCGCGGTGGAGCCTTTAAGCCTCGTACGAGCCCATACGATTTCCA 500
||..|||||||.||.||.|||||.||.||.||.||.||.||.||||||||
RBAM_026870__ 442 ATCCTGCGCGGGGGCGCGTTTAAACCCCGCACAAGTCCGTATGATTTCCA 491
BSNT_04332___ 501 AGGGCTTGGTGTTGAAGGCCTTCAAATTTTAAAACGTGTAGCGGATGAAT 550
|||.||.||.||.||||||||.||||||.|.|||||.||.||.|||||||
RBAM_026870__ 492 AGGTCTCGGCGTAGAAGGCCTGCAAATTCTTAAACGCGTCGCTGATGAAT 541
BSNT_04332___ 551 TTGATCTGGCGGTTATCAGTGAAATCGTAACTCCGGCTCATATCGAAGAA 600
.|||.||.|||||.|||||||||||||||||.||.||.||.||.||..||
RBAM_026870__ 542 ATGACCTCGCGGTGATCAGTGAAATCGTAACGCCCGCCCACATTGAGCAA 591
BSNT_04332___ 601 GCGCTGGACTACATTGATGTCATTCAAATCGGAGCGCGCAATATGCAAAA 650
|||.|.||.||||||||.||||||||.|||||.|||||.||.||||||||
RBAM_026870__ 592 GCGATTGATTACATTGACGTCATTCAGATCGGCGCGCGGAACATGCAAAA 641
BSNT_04332___ 651 CTTCGAATTGCTGAAAGCGGCCGGCGCCGTGAAAAAGCCAGTGCTTCTGA 700
|||.||||||||||||||.|||||..||||.||||||||.||..|..|.|
RBAM_026870__ 642 CTTTGAATTGCTGAAAGCCGCCGGTTCCGTTAAAAAGCCGGTATTGTTAA 691
BSNT_04332___ 701 AGCGCGGTCTTGCTGCAACGATCTCTGAATTCATCAATGCTGCTGAATAC 750
|.|||||||||||.|||||.||.||.||.|||||||||||.|||||||||
RBAM_026870__ 692 AACGCGGTCTTGCCGCAACAATTTCAGAGTTCATCAATGCAGCTGAATAC 741
BSNT_04332___ 751 ATCATGTCACAAGGAAATGACCAAATTATCCTTTGTGAGCGCGGAATCAG 800
|||||||||||||||||.||||||||.||.||||||||||||||||||||
RBAM_026870__ 742 ATCATGTCACAAGGAAACGACCAAATCATTCTTTGTGAGCGCGGAATCAG 791
BSNT_04332___ 801 AACATATGAAACAGCAACGAGAAACACGCTGGATATTTCAGCTGTGCCGA 850
|||.||.|||||.||||||||||||||.||.||.|||||.||.|||||||
RBAM_026870__ 792 AACGTACGAAACGGCAACGAGAAACACACTCGACATTTCTGCCGTGCCGA 841
BSNT_04332___ 851 TTTTGAAACAAGAAACGCATTTGCCAGTCTTTGTTGATGTTACGCATTCA 900
||||||||||.|||||.||.|||||.||.||||||||.||.||.||.|||
RBAM_026870__ 842 TTTTGAAACAGGAAACTCACTTGCCGGTGTTTGTTGACGTCACACACTCA 891
BSNT_04332___ 901 ACAGGCCGCCGTGACCTCTTGCTTCCGACAGCTAAAGC--CGCTTTAGCG 948
|||||||||||.||.|||.|||||||||||||.||||| ||||| |||
RBAM_026870__ 892 ACAGGCCGCCGCGATCTCCTGCTTCCGACAGCAAAAGCGGCGCTT--GCG 939
BSNT_04332___ 949 ATCGGTGCTGATGGCGTAATGGCTGAGGTTCACCCTGATCCGTCAGTCGC 998
|||||.|||||.|||||.|||||.||.||||||||||||||.||.||.||
RBAM_026870__ 940 ATCGGCGCTGACGGCGTGATGGCCGAAGTTCACCCTGATCCTTCCGTTGC 989
BSNT_04332___ 999 ACTTTCTGACTCTGCTCAGCAAATGGCGATTCCTGAATTCGAAAAATGGC 1048
.|||||.||||||||.|||||.||||..||.|||||||||||.|||||||
RBAM_026870__ 990 CCTTTCAGACTCTGCGCAGCAGATGGATATACCTGAATTCGAGAAATGGC 1039
BSNT_04332___ 1049 TGAATGAACTGAAGCCAATGGTGAAAGTCAACGCTTAA 1086
||||.|||.|.|||||||||.|||||||.||.||.|||
RBAM_026870__ 1040 TGAACGAATTAAAGCCAATGCTGAAAGTAAAAGCATAA 1077
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.