Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04331 and RBAM_026860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04331___ccpA.1.9828.seq
# -bsequence dna-align/RBAM_026860___ccpA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04331___ccpA-RBAM_026860___ccpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04331___ccpA-RBAM_026860___ccpA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04331___ccpA
# 2: RBAM_026860___ccpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1009
# Identity: 851/1009 (84.3%)
# Similarity: 851/1009 (84.3%)
# Gaps: 8/1009 ( 0.8%)
# Score: 3594.0
#
#
#=======================================
BSNT_04331___ 1 ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCAT 50
.|||||||.||||||||.||||||||.||.||||||||.|||||.||.||
RBAM_026860__ 1 GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTAT 50
BSNT_04331___ 51 GGCAACCGTTTCCCGTGTCGTGAACGGCAACCCGAATGTAAAACCGACAA 100
|||.||.||||||||.||||||||||||||||||||||||||||||||.|
RBAM_026860__ 51 GGCGACTGTTTCCCGCGTCGTGAACGGCAACCCGAATGTAAAACCGACGA 100
BSNT_04331___ 101 CGAGAAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAAC 150
|.|||||||||||.||||||||||||||.||.|||||.||.||.||.|||
RBAM_026860__ 101 CCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTATCGCCCGAAC 150
BSNT_04331___ 151 GCGGTGGCAAGAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCAT 200
|||||||||||||||||.|||||.||||||||.||.||.||.||.|||||
RBAM_026860__ 151 GCGGTGGCAAGAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCAT 200
BSNT_04331___ 201 CATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCGCGCGGAATTG 250
|||.||.||||||||||||||||||||.||.||.||||||||.|||||||
RBAM_026860__ 201 CATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCGCGTGGAATTG 250
BSNT_04331___ 251 AAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGAC 300
|||||||||||||.|||||.|||||.|||||||||||.||||||||.|||
RBAM_026860__ 251 AAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGAC 300
BSNT_04331___ 301 CAAAACATGGAGAAAGAGCTGCACTTGTTAAACACAATGCTCGGCAAACA 350
|||||..|.||||||||.|||||..|||||||.||.||||||||||||||
RBAM_026860__ 301 CAAAATCTTGAGAAAGAACTGCATCTGTTAAATACGATGCTCGGCAAACA 350
BSNT_04331___ 351 AGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG 400
|||||||||.|||||.|||||||||||.||||||||||||||||||||.|
RBAM_026860__ 351 AGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG 400
BSNT_04331___ 401 CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTT-GCCGCTTCTGTAGA 449
..|||||||||||.|||||.||||||||.|| ||| ||.||.||.||.||
RBAM_026860__ 401 AAGAATTTAAGCGCTCTCCTGTGCCGATCGT-CTTGGCGGCATCAGTGGA 449
BSNT_04331___ 450 AGAGCAGGAGGAAACACCGTCAGTCGCTATCGATTACGAACAGGCGATTT 499
|||.||||..||.||.||.||.|||||.||.|||||||||||||||||||
RBAM_026860__ 450 AGAACAGGGCGAGACGCCTTCTGTCGCCATTGATTACGAACAGGCGATTT 499
BSNT_04331___ 500 ATGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTC 549
||||||||||.||||||||..||||||||||.|||...||.|||||.|||
RBAM_026860__ 500 ATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATCGCATTC 549
BSNT_04331___ 550 GTTTCCGGACCAATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGG 599
||.||||||||.|||..|||.|||||||||||||||||||||||.|||||
RBAM_026860__ 550 GTCTCCGGACCGATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGG 599
BSNT_04331___ 600 CTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATGAACAATTTG 649
.||||||||.|||||||||||||||....||||||||||.||.|||||.|
RBAM_026860__ 600 GTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACGAGCAATTCG 649
BSNT_04331___ 650 TAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGC--AGC 697
||||.|||||.||||||||.|||||||||||..|.||.||.||.| |||
RBAM_026860__ 650 TAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGC 699
BSNT_04331___ 698 ATCTGATGAGCCTGGATAAAAAACCGACAGCCATTCTTTCTGCAACTGAT 747
.|||||.||||.||....||||||||.||.||||||||||||||.|||
RBAM_026860__ 700 --TTGATGGGCCTTGACCGGAAACCGACGGCGATTCTTTCTGCAACGGAT 747
BSNT_04331___ 748 GAAATGGCACTCGGCATTATCCATGCCGCTCAGGATC-AGGGCTTATCCA 796
||||||||.|||||||||||||||||.||.||.|||| |||.||| ||.|
RBAM_026860__ 748 GAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTT-TCGA 796
BSNT_04331___ 797 TTCCGGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTC 846
|.||.||.|||||.||.||||||||||||||.|||||.|||||.|||||.
RBAM_026860__ 797 TACCTGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTG 846
BSNT_04331___ 847 ATGGTTCGTCCTCAGCTTTCAACAGTTGTTCAGCCGACATATGATATCGG 896
|||||.||.|||||||||||||||||.||.|||||.||.||.||||||||
RBAM_026860__ 847 ATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGCCTACGTACGATATCGG 896
BSNT_04331___ 897 CGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTG 946
||||||.|||||||||||..||||.||.||.|||||.|||||||||||||
RBAM_026860__ 897 CGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTG 946
BSNT_04331___ 947 AAGAGCATATCGTCGAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACC 996
|||||||.|||||||||.||||.|||||.||.||..|.|||.|.||||||
RBAM_026860__ 947 AAGAGCAGATCGTCGAATTGCCTCACCGCATCGAATTAAGACAATCAACC 996
BSNT_04331___ 997 AAGTCATAA 1005
|||||||||
RBAM_026860__ 997 AAGTCATAA 1005
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