Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04324 and RBAM_026810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:47
# Commandline: needle
# -asequence dna-align/BSNT_04324___acuA.1.9828.seq
# -bsequence dna-align/RBAM_026810___acuA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04324___acuA-RBAM_026810___acuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04324___acuA-RBAM_026810___acuA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04324___acuA
# 2: RBAM_026810___acuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 635
# Identity: 514/635 (80.9%)
# Similarity: 514/635 (80.9%)
# Gaps: 4/635 ( 0.6%)
# Score: 2081.0
#
#
#=======================================
BSNT_04324___ 1 GTGGAACATCATAAAACATACCATTCAGCAAACATCAAAACAGCAACCGG 50
|||.|||||||||||||.||||||||..|||..||..|.||||||.||||
RBAM_026810__ 1 GTGAAACATCATAAAACGTACCATTCTTCAACAATTCAGACAGCAGCCGG 50
BSNT_04324___ 51 --CTCTTTACTGATAGAAGGGCCTGTCTCTCCAGAGGATTTGGCAGGTTA 98
|||||| |..||||||||||.||..||||||.||||.|.|||...||
RBAM_026810__ 51 CCCTCTTT--TAGTAGAAGGGCCCGTTCCTCCAGGGGATCTAGCACAGTA 98
BSNT_04324___ 99 TGAGTTTCATAAAGATTTAACCGCATTTCGCCCGCCTCGCGAGCAGCATG 148
||||||||||.|||...|.||.||.|||||||..||||..||.|||||..
RBAM_026810__ 99 TGAGTTTCATGAAGGCCTGACAGCCTTTCGCCTTCCTCATGAACAGCACA 148
BSNT_04324___ 149 AAGCGCTAGTCGACATTGCAGGCCTTCCCGAAGGGCGCATTATTATTGCC 198
|||||.||.||||.||.||.||.|||||.|||||.||.||.|||||||||
RBAM_026810__ 149 AAGCGTTAATCGAGATCGCCGGGCTTCCTGAAGGTCGGATCATTATTGCC 198
BSNT_04324___ 199 AGAGATGGCCGAACCATTATCGGCTATGTCACGTATTTATATCCTGACCC 248
||.||.||.|..||.||||||||||||||.|||||||||||||||||.||
RBAM_026810__ 199 AGGGACGGACAGACGATTATCGGCTATGTGACGTATTTATATCCTGATCC 248
BSNT_04324___ 249 GCTCGAAAGATGGTCTGAAGGAAATATGGAGGATTTGATTGAGCTCGGAG 298
|||.|||.|.||||||||.|||||||||||.||..|..||||.|||||.|
RBAM_026810__ 249 GCTTGAACGGTGGTCTGACGGAAATATGGAAGACCTCCTTGAACTCGGGG 298
BSNT_04324___ 299 CCATCGAAGTAGCGCCGGACTATCGGGGATGCGCTGTCGGAAAGACGCTC 348
|.|||||.||.||.||.|.|||..||||.||..||||||||||.|||.|.
RBAM_026810__ 299 CGATCGAGGTCGCTCCCGGCTACAGGGGCTGTTCTGTCGGAAAAACGTTG 348
BSNT_04324___ 349 CTGACCGTCAGCATGATGGATGAACAAATGGAAAACTACATTGTGATGAC 398
|||||.||||||||||||||||||||.||||||...|||||..|.|||||
RBAM_026810__ 349 CTGACAGTCAGCATGATGGATGAACAGATGGAACGGTACATCATCATGAC 398
BSNT_04324___ 399 GACAGAATATTACTGGCATTGGGATTTAAAAGGGATGAAAAAAGATGTGT 448
|||.|||||||||||||||||||||||||||||.||||||||||||||||
RBAM_026810__ 399 GACGGAATATTACTGGCATTGGGATTTAAAAGGAATGAAAAAAGATGTGT 448
BSNT_04324___ 449 GGGAATACAGAAAGATCATGGAAAAGATGATGAATGCAGGCGGATTGGTC 498
|||||||||||||||||||||||||||||||||||||.||.||..|.|||
RBAM_026810__ 449 GGGAATACAGAAAGATCATGGAAAAGATGATGAATGCCGGGGGTCTTGTC 498
BSNT_04324___ 499 TGGTTTGCAACGGATGAGCCGGAGATCAGCTCCCACCCTGCAAACTGTCT 548
|||||.|||||||||||.|||||.||||||||.||.||.||.||.|||||
RBAM_026810__ 499 TGGTTCGCAACGGATGAACCGGAAATCAGCTCTCATCCGGCCAATTGTCT 548
BSNT_04324___ 549 GATGGCCCGCATTGGGAAAAACGTCAGCCAAGAATCAATTGAGCAATTTG 598
||||||||||||.||.|...|||||||.||.||.||||||||.||.||.|
RBAM_026810__ 549 GATGGCCCGCATCGGCAGGCACGTCAGTCAGGAGTCAATTGAACAGTTCG 598
BSNT_04324___ 599 ACAGGCTCCGTTTTTATCATCGTTATATGTATTAA 633
|||||||.|||||||||||.||.|.||||||||.|
RBAM_026810__ 599 ACAGGCTTCGTTTTTATCAGCGATTTATGTATTGA 633
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